RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SAAL1Q96ER3 474 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 ZBTB45Q96K62 511 aaPredicted RBP22.79■■□□□ 1.24
SND1-214ENST00000489417 GLT1D1Q96MS3 346 aa22.79■■□□□ 1.24
SND1-214ENST00000489417 GCOM2Q9BZD3 368 aaPredicted RBP22.79■■□□□ 1.24
SND1-214ENST00000489417 A0A1W2PQC6 194 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 TTLL13PA6NNM8 815 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 KBTBD13C9JR72 458 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 TOM1L1O75674 476 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 KRT13P13646 458 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 MATR3P43243 847 aaKnown RBP eCLIP22.78■■□□□ 1.24
SND1-214ENST00000489417 PTPN11Q06124 597 aaPredicted RBP22.78■■□□□ 1.24
SND1-214ENST00000489417 HSP90AA2PQ14568 343 aaPredicted RBP22.78■■□□□ 1.24
SND1-214ENST00000489417 DCAF17Q5H9S7 520 aaPredicted RBP22.78■■□□□ 1.24
SND1-214ENST00000489417 ZNF710Q8N1W2 664 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 GPD1LQ8N335 351 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 PRIMPOLQ96LW4 560 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 FBXL18Q96ME1 805 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 ANKFY1Q9P2R3 1169 aa22.78■■□□□ 1.24
SND1-214ENST00000489417 ITIH6Q6UXX5 1313 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 A0A0B4J269 797 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 MYCP01106 439 aaPredicted RBP22.77■■□□□ 1.24
SND1-214ENST00000489417 IQCF3P0C7M6 154 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 SNRNP35Q16560 246 aaKnown RBP22.77■■□□□ 1.24
SND1-214ENST00000489417 AMHR2Q16671 573 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 TMEM132AQ24JP5 1023 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 ATF7IP2Q5U623 682 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 TSHZ1Q6ZSZ6 1077 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 INTS8Q75QN2 995 aaKnown RBP22.77■■□□□ 1.24
SND1-214ENST00000489417 SERINC5Q86VE9 423 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 SLC35C1Q96A29 364 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 MSTO1Q9BUK6 570 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 HAPLN2Q9GZV7 340 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 KIAA1586Q9HCI6 787 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 AGO2Q9UKV8 859 aaKnown RBP22.77■■□□□ 1.24
SND1-214ENST00000489417 PHF24Q9UPV7 400 aa22.77■■□□□ 1.24
SND1-214ENST00000489417 CNTNAP2Q9UHC6 1331 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 A0A1W2PQ45 241 aaPredicted RBP22.76■■□□□ 1.23
SND1-214ENST00000489417 A0A1W2PQY0 241 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 B4GALT5O43286 388 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 EXTL3O43909 919 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 CSDE1O75534 798 aaKnown RBP22.76■■□□□ 1.23
SND1-214ENST00000489417 AFPP02771 609 aaKnown RBP22.76■■□□□ 1.23
SND1-214ENST00000489417 ADRB2P07550 413 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 KCNH2Q12809 1159 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 BFSP1Q12934 665 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 TCERG1LQ5VWI1 586 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 FBXO46Q6PJ61 603 aaPredicted RBP22.76■■□□□ 1.23
SND1-214ENST00000489417 CCDC186Q7Z3E2 898 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 RSPH3Q86UC2 560 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 CBWD2Q8IUF1 395 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 DEFB118Q96PH6 123 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 ERGIC2Q96RQ1 377 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 OSMRQ99650 979 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 RNF208Q9H0X6 261 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 GINS2Q9Y248 185 aa22.76■■□□□ 1.23
SND1-214ENST00000489417 CLDN3O15551 220 aa22.75■■□□□ 1.23
SND1-214ENST00000489417 LDHAP00338 332 aaKnown RBP22.75■■□□□ 1.23
SND1-214ENST00000489417 RPLP2P05387 115 aaKnown RBP22.75■■□□□ 1.23
SND1-214ENST00000489417 CTCFP49711 727 aaPredicted RBP22.75■■□□□ 1.23
SND1-214ENST00000489417 LBX1P52954 281 aa22.75■■□□□ 1.23
SND1-214ENST00000489417 TBX2Q13207 712 aaPredicted RBP22.75■■□□□ 1.23
SND1-214ENST00000489417 SYCP1Q15431 976 aa22.75■■□□□ 1.23
SND1-214ENST00000489417 MPZL3Q6UWV2 235 aa22.75■■□□□ 1.23
SND1-214ENST00000489417 FAM213AQ9BRX8 229 aa22.75■■□□□ 1.23
SND1-214ENST00000489417 TCHPQ9BT92 498 aa22.75■■□□□ 1.23
SND1-214ENST00000489417 CDHR5Q9HBB8 845 aa22.75■■□□□ 1.23
SND1-214ENST00000489417 TNFSF13BQ9Y275 285 aa22.75■■□□□ 1.23
SND1-214ENST00000489417 DNM1LO00429 736 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 ABLIM1O14639 778 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 ERLIN2O94905 339 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 HSPA1AP0DMV8 641 aaKnown RBP22.74■■□□□ 1.23
SND1-214ENST00000489417 HSPA1BP0DMV9 641 aaKnown RBP22.74■■□□□ 1.23
SND1-214ENST00000489417 DARSP14868 501 aaKnown RBP22.74■■□□□ 1.23
SND1-214ENST00000489417 PROZP22891 400 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 VAMP7P51809 220 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 MCL1Q07820 350 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 PTGISQ16647 500 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 ZBTB33Q86T24 672 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 TRIM44Q96DX7 344 aaPredicted RBP22.74■■□□□ 1.23
SND1-214ENST00000489417 MFSD14AQ96MC6 490 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 PTPRHQ9HD43 1115 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 STARD7Q9NQZ5 370 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 OGDHLQ9ULD0 1010 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.74■■□□□ 1.23
SND1-214ENST00000489417 TRIP12Q14669 1992 aaPredicted RBP22.74■■□□□ 1.23
SND1-214ENST00000489417 A0A0U1RQG5 324 aaPredicted RBP22.74■■□□□ 1.23
SND1-214ENST00000489417 ZNF233A6NK53 670 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 TSPAN1O60635 241 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 TRIM49P0CI25 452 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 TRIM49CP0CI26 452 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 HARSP12081 509 aaKnown RBP22.74■■□□□ 1.23
SND1-214ENST00000489417 CRYBB1P53674 252 aaPredicted RBP22.74■■□□□ 1.23
SND1-214ENST00000489417 GSDMDP57764 484 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 MRPS6P82932 125 aaKnown RBP22.74■■□□□ 1.23
SND1-214ENST00000489417 CYP24A1Q07973 514 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 NOLC1Q14978 699 aaKnown RBP eCLIP22.74■■□□□ 1.238e-19■□□□□ 10.8
SND1-214ENST00000489417 PCBP1Q15365 356 aaKnown RBP eCLIP22.74■■□□□ 1.234e-6■■■■□ 20.1
SND1-214ENST00000489417 ZNF568Q3ZCX4 644 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 EEF1DP3Q658K8 133 aa22.74■■□□□ 1.23
SND1-214ENST00000489417 RPAINQ86UA6 219 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms