RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 FAM49AQ9H0Q0 323 aaPredicted RBP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 ANKFY1Q9P2R3 1169 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 HDAC6Q9UBN7 1215 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 DDX20Q9UHI6 824 aaKnown RBP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL21A1-211ENST00000488912 PTCH2Q9Y6C5 1203 aa11.92□□□□□ -0.5
COL21A1-211ENST00000488912 RNF225M0QZC1 329 aaPredicted RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 AFPP02771 609 aaKnown RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 IQCF3P0C7M6 154 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 TRIM49P0CI25 452 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 TRIM49CP0CI26 452 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 PHKA2P46019 1235 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 CCZ1BP86790 482 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 CCZ1P86791 482 aaPredicted RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 ZNF200P98182 395 aaPredicted RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 PPP2R3AQ06190 1150 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 SNRNP35Q16560 246 aaKnown RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 C7orf31Q8N865 590 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 ZBTB45Q96K62 511 aaPredicted RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 PCMTD1Q96MG8 357 aaPredicted RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 NFKBIZQ9BYH8 718 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 STYXL1Q9Y6J8 313 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 TREHO43280 583 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 MFAP3LO75121 409 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 CSDE1O75534 798 aaKnown RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 CYP2C9P11712 490 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 TRIM21P19474 475 aaKnown RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 HOXC8P31273 242 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 GRK4P32298 578 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 GPC3P51654 580 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 PRMT2P55345 433 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 POU5F1BQ06416 359 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 TMEM62Q0P6H9 643 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 KCNMA1Q12791 1236 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 TRIM14Q14142 442 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 INTS8Q75QN2 995 aaKnown RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 KLHDC9Q8NEP7 349 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 FBXL18Q96ME1 805 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 CRACR2AQ9BSW2 395 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 MRPL4Q9BYD3 311 aaKnown RBP11.91□□□□□ -0.5
COL21A1-211ENST00000488912 TTYH3Q9C0H2 523 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 FZD8Q9H461 694 aa11.91□□□□□ -0.5
COL21A1-211ENST00000488912 TTC26A0AVF1 554 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 C17orf102A2RUQ5 167 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 AKR1B15C9JRZ8 316 aaPredicted RBP11.9□□□□□ -0.5
COL21A1-211ENST00000488912 EPHB6O15197 1021 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 MAPK13O15264 365 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 B4GALT5O43286 388 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 ZEB2O60315 1214 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 ASGR1P07306 291 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
COL21A1-211ENST00000488912 NLRP11P59045 1033 aaKnown RBP11.9□□□□□ -0.5
COL21A1-211ENST00000488912 DLG4P78352 724 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 KCNA10Q16322 511 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 CCSAPQ6IQ19 270 aaPredicted RBP11.9□□□□□ -0.5
COL21A1-211ENST00000488912 ZPBP2Q6X784 338 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 IFNLR1Q8IU57 520 aaPredicted RBP11.9□□□□□ -0.5
COL21A1-211ENST00000488912 GPD1LQ8N335 351 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 PLEKHO2Q8TD55 490 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 SCLT1Q96NL6 688 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 ACO2Q99798 780 aaKnown RBP11.9□□□□□ -0.5
COL21A1-211ENST00000488912 FAM207AQ9NSI2 230 aaPredicted RBP11.9□□□□□ -0.5
COL21A1-211ENST00000488912 PYCARDQ9ULZ3 195 aa11.9□□□□□ -0.5
COL21A1-211ENST00000488912 A0A0B4J269 797 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 SMIM35A0A1B0GVV1 85 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 ACKR2O00590 384 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 KRT13P13646 458 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 VAMP7P51809 220 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 KIZQ2M2Z5 673 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 NBPF20Q3BBV1 942 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 SLFN12LQ6IEE8 588 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 FAM213AQ9BRX8 229 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 MSTO1Q9BUK6 570 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 MMRN2Q9H8L6 949 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 AGO2Q9UKV8 859 aaKnown RBP11.89□□□□□ -0.51
COL21A1-211ENST00000488912 TOM1L1O75674 476 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 TPM1P09493 284 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 SKILP12757 684 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 MATR3P43243 847 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL21A1-211ENST00000488912 FMO5P49326 533 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 PRPF4BQ13523 1007 aaKnown RBP11.89□□□□□ -0.51
COL21A1-211ENST00000488912 CBWD6Q4V339 395 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 CBWD3Q5JTY5 395 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 CBWD5Q5RIA9 395 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 ZBTB41Q5SVQ8 909 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 CNGA4Q8IV77 575 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 DNAJB3Q8WWF6 145 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 WBP1LQ9NX94 342 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 GTF2IRD1Q9UHL9 959 aa11.89□□□□□ -0.51
COL21A1-211ENST00000488912 ABLIM1O14639 778 aa11.88□□□□□ -0.51
COL21A1-211ENST00000488912 CLDN3O15551 220 aa11.88□□□□□ -0.51
COL21A1-211ENST00000488912 EXTL3O43909 919 aa11.88□□□□□ -0.51
COL21A1-211ENST00000488912 GPR32O75388 356 aa11.88□□□□□ -0.51
COL21A1-211ENST00000488912 HARSP12081 509 aaKnown RBP11.88□□□□□ -0.51
COL21A1-211ENST00000488912 ACOT2P49753 483 aa11.88□□□□□ -0.51
COL21A1-211ENST00000488912 C1QTNF8P60827 252 aa11.88□□□□□ -0.51
COL21A1-211ENST00000488912 APBA1Q02410 837 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms