RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 RPS6KA4O75676 772 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 ABHD18Q0P651 414 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 FSCN1Q16658 493 aaKnown RBP6.67□□□□□ -1.34
PTPN4-212ENST00000488896 ZNF662Q6ZS27 426 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 XYLT1Q86Y38 959 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 ACAP3Q96P50 834 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 SORCS2Q96PQ0 1159 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 ENKD1Q9H0I2 346 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 MMRN2Q9H8L6 949 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 HDAC5Q9UQL6 1122 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 XDHP47989 1333 aa6.67□□□□□ -1.34
PTPN4-212ENST00000488896 TMEM127O75204 238 aa6.66□□□□□ -1.34
PTPN4-212ENST00000488896 ENPP1P22413 925 aa6.66□□□□□ -1.34
PTPN4-212ENST00000488896 GZMKP49863 264 aa6.66□□□□□ -1.34
PTPN4-212ENST00000488896 C1QL3Q5VWW1 255 aa6.66□□□□□ -1.34
PTPN4-212ENST00000488896 APBB1IPQ7Z5R6 666 aaPredicted RBP6.66□□□□□ -1.34
PTPN4-212ENST00000488896 GLB1L3Q8NCI6 653 aaPredicted RBP6.66□□□□□ -1.34
PTPN4-212ENST00000488896 CDC5LQ99459 802 aaKnown RBP6.66□□□□□ -1.34
PTPN4-212ENST00000488896 MRIQ9BWK5 157 aa6.66□□□□□ -1.34
PTPN4-212ENST00000488896 ZNF703Q9H7S9 590 aaPredicted RBP6.66□□□□□ -1.34
PTPN4-212ENST00000488896 GOLGA6L6A8MZA4 724 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 DNAJC6O75061 913 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 GYPEP15421 78 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 CPEP16870 476 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 HMGA2P52926 109 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 SLC25A3Q00325 362 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 MRPL49Q13405 166 aaKnown RBP6.65□□□□□ -1.34
PTPN4-212ENST00000488896 TOB2Q14106 344 aaPredicted RBP6.65□□□□□ -1.34
PTPN4-212ENST00000488896 FHL2Q14192 279 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 FNDC7Q5VTL7 733 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 ATL2Q8NHH9 583 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 ZNF483Q8TF39 744 aaPredicted RBP6.65□□□□□ -1.34
PTPN4-212ENST00000488896 COG1Q8WTW3 980 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 FAM126AQ9BYI3 521 aaPredicted RBP6.65□□□□□ -1.34
PTPN4-212ENST00000488896 C14orf119Q9NWQ9 140 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 SORCS3Q9UPU3 1222 aa6.65□□□□□ -1.34
PTPN4-212ENST00000488896 ZMYM3Q14202 1370 aa6.65□□□□□ -1.35
PTPN4-212ENST00000488896 ITGA10O75578 1167 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 EYA4O95677 639 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 CTSSP25774 331 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 MCM7P33993 719 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 APBA1Q02410 837 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 KRT26Q7Z3Y9 468 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 FAM83AQ86UY5 434 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 WDR66Q8TBY9 1149 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 MDM1Q8TC05 714 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 SNX33Q8WV41 574 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 NEU4Q8WWR8 484 aaPredicted RBP6.64□□□□□ -1.35
PTPN4-212ENST00000488896 CLIP3Q96DZ5 547 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 RAX2Q96IS3 184 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 CPEB1Q9BZB8 566 aaKnown RBP6.64□□□□□ -1.35
PTPN4-212ENST00000488896 PCED1AQ9H1Q7 454 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 SPON1Q9HCB6 807 aa6.64□□□□□ -1.35
PTPN4-212ENST00000488896 PRKD3O94806 890 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 HSP90B1P14625 803 aaKnown RBP6.63□□□□□ -1.35
PTPN4-212ENST00000488896 ADSLP30566 484 aaPredicted RBP6.63□□□□□ -1.35
PTPN4-212ENST00000488896 PTTG1IPP53801 180 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 WNT3AP56704 352 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 RABL3Q5HYI8 236 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 TOR2AQ5JU69 321 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 EGFLAMQ63HQ2 1017 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 CPT1CQ8TCG5 803 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 LMBR1Q8WVP7 490 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 AHCYL2Q96HN2 611 aaKnown RBP6.63□□□□□ -1.35
PTPN4-212ENST00000488896 FAM193BQ96PV7 902 aaPredicted RBP6.63□□□□□ -1.35
PTPN4-212ENST00000488896 LSM14BQ9BX40 385 aaKnown RBP6.63□□□□□ -1.35
PTPN4-212ENST00000488896 NRDE2Q9H7Z3 1164 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 GPRC5DQ9NZD1 345 aa6.63□□□□□ -1.35
PTPN4-212ENST00000488896 EIF2B4Q9UI10 523 aaKnown RBP6.63□□□□□ -1.35
PTPN4-212ENST00000488896 AKR1B10O60218 316 aa6.62□□□□□ -1.35
PTPN4-212ENST00000488896 SCAF4O95104 1147 aaKnown RBP6.62□□□□□ -1.35
PTPN4-212ENST00000488896 ADH4P08319 380 aa6.62□□□□□ -1.35
PTPN4-212ENST00000488896 SRSF2Q01130 221 aaKnown RBP6.62□□□□□ -1.35
PTPN4-212ENST00000488896 MEF2AQ02078 507 aaPredicted RBP6.62□□□□□ -1.35
PTPN4-212ENST00000488896 FBXO18Q8NFZ0 1043 aa6.62□□□□□ -1.35
PTPN4-212ENST00000488896 TSPEARQ8WU66 669 aa6.62□□□□□ -1.35
PTPN4-212ENST00000488896 AUTS2Q8WXX7 1259 aa6.62□□□□□ -1.35
PTPN4-212ENST00000488896 RPTORQ8N122 1335 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 PRR5-ARHGAP8B1AHC4 643 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 GPR39O43194 453 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 ADCY6O43306 1168 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 VIL1P09327 827 aaKnown RBP6.61□□□□□ -1.35
PTPN4-212ENST00000488896 MAKP20794 623 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 MRPS9P82933 396 aaKnown RBP6.61□□□□□ -1.35
PTPN4-212ENST00000488896 C19orf54Q5BKX5 351 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 DCAF17Q5H9S7 520 aaPredicted RBP6.61□□□□□ -1.35
PTPN4-212ENST00000488896 ANKS6Q68DC2 871 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 SPATS2Q86XZ4 545 aaKnown RBP6.61□□□□□ -1.35
PTPN4-212ENST00000488896 ZNF276Q8N554 614 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 LILRA3Q8N6C8 439 aaPredicted RBP6.61□□□□□ -1.35
PTPN4-212ENST00000488896 REPS2Q8NFH8 660 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 OR52N2Q8NGI0 321 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 ZNF480Q8WV37 535 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 RIN2Q8WYP3 895 aaPredicted RBP6.61□□□□□ -1.35
PTPN4-212ENST00000488896 TRIM8Q9BZR9 551 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 IFT122Q9HBG6 1241 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 DNAJC28Q9NX36 388 aa6.61□□□□□ -1.35
PTPN4-212ENST00000488896 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.61□□□□□ -1.35
PTPN4-212ENST00000488896 APOBEC3AP31941 199 aaPredicted RBP6.6□□□□□ -1.35
PTPN4-212ENST00000488896 PTPN7P35236 360 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms