RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 PEX3P56589 373 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 RPS6P62753 249 aaKnown RBP15.33■□□□□ 0.05
ABCB1-207ENST00000488737 PDCLQ13371 301 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 TNFAIP1Q13829 316 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 UGCGQ16739 394 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 NBPF9Q3BBW0 867 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 AGBL2Q5U5Z8 902 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 EPS8L1Q8TE68 723 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 PDCD2LQ9BRP1 358 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 C17orf75Q9HAS0 396 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 MYOZ2Q9NPC6 264 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 PXMP2Q9NR77 195 aa15.33■□□□□ 0.05
ABCB1-207ENST00000488737 PPP1R1BQ9UD71 204 aaPredicted RBP15.33■□□□□ 0.05
ABCB1-207ENST00000488737 NOCTQ9UK39 431 aaKnown RBP15.33■□□□□ 0.05
ABCB1-207ENST00000488737 ATXN2Q99700 1313 aaKnown RBP15.33■□□□□ 0.04
ABCB1-207ENST00000488737 CTNND1O60716 968 aaKnown RBP15.33■□□□□ 0.04
ABCB1-207ENST00000488737 ZBED4O75132 1171 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 ERLIN2O94905 339 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 ADRB2P07550 413 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 EIF2AK2P19525 551 aaKnown RBP15.33■□□□□ 0.04
ABCB1-207ENST00000488737 KCNA3P22001 575 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 GBP1P32455 592 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 GTF2H1P32780 548 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 DR1Q01658 176 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 CXCL9Q07325 125 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 ZNF844Q08AG5 666 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 RASA3Q14644 834 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 SNRNP35Q16560 246 aaKnown RBP15.33■□□□□ 0.04
ABCB1-207ENST00000488737 XKR9Q5GH70 373 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 DUPD1Q68J44 220 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 ZNF746Q6NUN9 644 aaPredicted RBP15.33■□□□□ 0.04
ABCB1-207ENST00000488737 SPATS2Q86XZ4 545 aaKnown RBP15.33■□□□□ 0.04
ABCB1-207ENST00000488737 C10orf67Q8IYJ2 551 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 TMEM161BQ8NDZ6 487 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 TMC2Q8TDI7 906 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 SPIRE2Q8WWL2 714 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 SHC3Q92529 594 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 ZSWIM1Q9BR11 485 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 ERP44Q9BS26 406 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 WNT8AQ9H1J5 351 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 RASAL2Q9UJF2 1139 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 TBX20Q9UMR3 447 aa15.33■□□□□ 0.04
ABCB1-207ENST00000488737 CTDP1Q9Y5B0 961 aaPredicted RBP15.33■□□□□ 0.04
ABCB1-207ENST00000488737 ZNFX1Q9P2E3 1918 aaKnown RBP15.33■□□□□ 0.04
ABCB1-207ENST00000488737 DOCK1Q14185 1865 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 KIAA1217Q5T5P2 1943 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 TRIM66O15016 1216 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 PHF2O75151 1096 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 CCNE2O96020 404 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 CHRNB2P17787 502 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 LSP1P33241 339 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 MDH1P40925 334 aaKnown RBP15.32■□□□□ 0.04
ABCB1-207ENST00000488737 ATP1A2P50993 1020 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 GPC3P51654 580 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 DMP1Q13316 513 aaPredicted RBP15.32■□□□□ 0.04
ABCB1-207ENST00000488737 PRPF4BQ13523 1007 aaKnown RBP15.32■□□□□ 0.04
ABCB1-207ENST00000488737 FAM102BQ5T8I3 360 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 KRT39Q6A163 491 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 RNF207Q6ZRF8 634 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 USP37Q86T82 979 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 ATP8B4Q8TF62 1192 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 ALG3Q92685 438 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 KIFAP3Q92845 792 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 GPRASP2Q96D09 838 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 TEPSINQ96N21 525 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 RMDN3Q96TC7 470 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 CELF4Q9BZC1 486 aaKnown RBP15.32■□□□□ 0.04
ABCB1-207ENST00000488737 EPN3Q9H201 632 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 TMEM8AQ9HCN3 771 aa15.32■□□□□ 0.04
ABCB1-207ENST00000488737 MAFGO15525 162 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 DKC1O60832 514 aaKnown RBP eCLIP15.31■□□□□ 0.04
ABCB1-207ENST00000488737 PPFIA2O75334 1257 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 SGPL1O95470 568 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 MYCLP12524 364 aaPredicted RBP15.31■□□□□ 0.04
ABCB1-207ENST00000488737 DPEP1P16444 411 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 CHRNA3P32297 505 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 EIF3BP55884 814 aaKnown RBP15.31■□□□□ 0.04
ABCB1-207ENST00000488737 CIAPIN1Q6FI81 312 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 B4GALNT4Q76KP1 1039 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 PARD3BQ8TEW8 1205 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 UBLCP1Q8WVY7 318 aaPredicted RBP15.31■□□□□ 0.04
ABCB1-207ENST00000488737 FBXL18Q96ME1 805 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 KREMEN1Q96MU8 473 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 RUNDC3BQ96NL0 473 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 FMO2Q99518 471 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 NTPCRQ9BSD7 190 aaKnown RBP15.31■□□□□ 0.04
ABCB1-207ENST00000488737 PAGR1Q9BTK6 254 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 MOV10L1Q9BXT6 1211 aaKnown RBP15.31■□□□□ 0.04
ABCB1-207ENST00000488737 TXLNGYQ9BZA5 131 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 GPRC5CQ9NQ84 441 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 GTF3C4Q9UKN8 822 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 NR2E1Q9Y466 385 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 TULP1O00294 542 aaPredicted RBP15.31■□□□□ 0.04
ABCB1-207ENST00000488737 CYP1A2P05177 515 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 CCND2P30279 289 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 ADSSP30520 456 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 NPTX2P47972 431 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 ARHGEF16Q5VV41 709 aa15.31■□□□□ 0.04
ABCB1-207ENST00000488737 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms