RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 NGRNQ9NPE2 291 aaKnown RBP19.62■□□□□ 0.73
ITGB1-215ENST00000488494 CD207Q9UJ71 328 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 DNM3Q9UQ16 869 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 FAM50BQ9Y247 325 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 C5orf42Q9H799 3197 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 ARL5CA6NH57 179 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 TTLL13PA6NNM8 815 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 PRKCBP05771 671 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 GALTP07902 379 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 CA8P35219 290 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 SMAD4Q13485 552 aaKnown RBP19.61■□□□□ 0.73
ITGB1-215ENST00000488494 SMC1AQ14683 1233 aaKnown RBP19.61■□□□□ 0.73
ITGB1-215ENST00000488494 TMEM132AQ24JP5 1023 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 ARL6IP4Q66PJ3 421 aaKnown RBP19.61■□□□□ 0.73
ITGB1-215ENST00000488494 HACE1Q8IYU2 909 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 VN1R2Q8NFZ6 395 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 IGSF21Q96ID5 467 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 IFT74Q96LB3 600 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 ZFP42Q96MM3 310 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 GAD1Q99259 594 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 CDCA3Q99618 268 aaPredicted RBP19.61■□□□□ 0.73
ITGB1-215ENST00000488494 CCDC113Q9H0I3 377 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 FZD8Q9H461 694 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 UBN1Q9NPG3 1134 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 CLEC1BQ9P126 229 aa19.61■□□□□ 0.73
ITGB1-215ENST00000488494 A0A1B0GUA9 196 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 FSD2A1L4K1 749 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 CARNS1A5YM72 827 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 DDHD2O94830 711 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 PDCP20941 246 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 SCNN1GP51170 649 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 PRPF4BQ13523 1007 aaKnown RBP19.6■□□□□ 0.73
ITGB1-215ENST00000488494 MAPK6Q16659 721 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 FAM187BQ17R55 369 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 FAM178BQ8IXR5 827 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 MSLNLQ96KJ4 702 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 FAM193BQ96PV7 902 aaPredicted RBP19.6■□□□□ 0.73
ITGB1-215ENST00000488494 PDZD7Q9H5P4 517 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 KANSL3Q9P2N6 904 aa19.6■□□□□ 0.73
ITGB1-215ENST00000488494 INPPL1O15357 1258 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 MBTPS2O43462 519 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 HIP1RO75146 1068 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 EDN1P05305 212 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 AKAP5P24588 427 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 VPS52Q8N1B4 723 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 CDK5RAP3Q96JB5 506 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 PNMA5Q96PV4 448 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 PLIN2Q99541 437 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 TMEM175Q9BSA9 504 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 VN1R3Q9BXE9 311 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 ZBP1Q9H171 429 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 CD320Q9NPF0 282 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 FOXD4L1Q9NU39 408 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 USP20Q9Y2K6 914 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 GIT1Q9Y2X7 761 aa19.59■□□□□ 0.73
ITGB1-215ENST00000488494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.58■□□□□ 0.72
ITGB1-215ENST00000488494 C2orf71A6NGG8 1288 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 K7ELQ4 463 aaPredicted RBP19.58■□□□□ 0.72
ITGB1-215ENST00000488494 N4BP3O15049 544 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 BMP15O95972 392 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 SSBP05455 408 aaKnown RBP eCLIP19.58■□□□□ 0.72
ITGB1-215ENST00000488494 SSTR3P32745 418 aaPredicted RBP19.58■□□□□ 0.72
ITGB1-215ENST00000488494 EFNA5P52803 228 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 HYIQ5T013 277 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 LLGL2Q6P1M3 1020 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 DDX53Q86TM3 631 aaKnown RBP19.58■□□□□ 0.72
ITGB1-215ENST00000488494 DAW1Q8N136 415 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 SMRP1Q8NCR6 262 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 AUTS2Q8WXX7 1259 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 NT5C3AQ9H0P0 336 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 PRG3Q9Y2Y8 225 aaPredicted RBP19.58■□□□□ 0.72
ITGB1-215ENST00000488494 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
ITGB1-215ENST00000488494 ZMYM2Q9UBW7 1377 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 PHLPP2Q6ZVD8 1323 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 ACKR2O00590 384 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 SRGAP2BP0DMP2 458 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 SYT1P21579 422 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 ZP2Q05996 745 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 COASYQ13057 564 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 MAPK7Q13164 816 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 DMP1Q13316 513 aaPredicted RBP19.57■□□□□ 0.72
ITGB1-215ENST00000488494 SMAD2Q15796 467 aaKnown RBP19.57■□□□□ 0.72
ITGB1-215ENST00000488494 TMEM119Q4V9L6 283 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 RINT1Q6NUQ1 792 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 CABP7Q86V35 215 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 MRPL43Q8N983 215 aaKnown RBP19.57■□□□□ 0.72
ITGB1-215ENST00000488494 DRC1Q96MC2 740 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 KLK14Q9P0G3 267 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 PARP2Q9UGN5 583 aa19.57■□□□□ 0.72
ITGB1-215ENST00000488494 CCDC169A6NNP5 214 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 NPTX2P47972 431 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 PEX3P56589 373 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 DSC1Q08554 894 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 RAD51AP2Q09MP3 1159 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 RESTQ13127 1097 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 BMS1Q14692 1282 aaKnown RBP19.56■□□□□ 0.72
ITGB1-215ENST00000488494 SF3A1Q15459 793 aaKnown RBP19.56■□□□□ 0.72
ITGB1-215ENST00000488494 EEF1DP3Q658K8 133 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 C1orf186Q6ZWK4 172 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 COLGALT2Q8IYK4 626 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms