RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SOX7Q9BT81 388 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 ADI1Q9BV57 179 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 QRSL1Q9H0R6 528 aaKnown RBP5.81□□□□□ -1.48
ITGB1-214ENST00000488427 CCM2LQ9NUG4 571 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-214ENST00000488427 EVLQ9UI08 416 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-214ENST00000488427 TMPRSS11EQ9UL52 423 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 EDARQ9UNE0 448 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 SHTN1A0MZ66 631 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 TRIM75PA6NK02 468 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 MUSKO15146 869 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 ERVK-21P61565 698 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 TRIM25Q14258 630 aaKnown RBP5.8□□□□□ -1.48
ITGB1-214ENST00000488427 PRKD1Q15139 912 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-214ENST00000488427 CLUL1Q15846 466 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 FAM111BQ6SJ93 734 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 LHFPL2Q6ZUX7 228 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 GAREM2Q75VX8 874 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 FUKQ8N0W3 1084 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 THEMISQ8N1K5 641 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-214ENST00000488427 OR5M3Q8NGP4 307 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 TGFBRAP1Q8WUH2 860 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 EDAQ92838 391 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 C8orf49Q96NF6 230 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 SSBP3Q9BWW4 388 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-214ENST00000488427 GREM2Q9H772 168 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 GPR45Q9Y5Y3 372 aa5.8□□□□□ -1.48
ITGB1-214ENST00000488427 UBE2QL1A1L167 161 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 FAM171A2A8MVW0 826 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 MATN2O00339 956 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 GNAT2P19087 354 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 CCND1P24385 295 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 ECHS1P30084 290 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 CRHR1P34998 444 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 MSX2P35548 267 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-214ENST00000488427 SLC16A1P53985 500 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 CDK17Q00537 523 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 MALLQ13021 153 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 TOR2AQ5JU69 321 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 FKBP15Q5T1M5 1219 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 PGM2L1Q6PCE3 622 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 SGMS1Q86VZ5 419 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 SLC41A1Q8IVJ1 513 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 GSPT2Q8IYD1 628 aaKnown RBP5.79□□□□□ -1.48
ITGB1-214ENST00000488427 GPR135Q8IZ08 494 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 GLB1L3Q8NCI6 653 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-214ENST00000488427 SNX33Q8WV41 574 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 MIEF2Q96C03 454 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 GPHA2Q96T91 129 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 PTPN18Q99952 460 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 FDXACB1Q9BRP7 624 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-214ENST00000488427 C1QTNF3Q9BXJ4 246 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 KLC2Q9H0B6 622 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 HDAC5Q9UQL6 1122 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 PEG3Q9GZU2 1588 aa5.79□□□□□ -1.48
ITGB1-214ENST00000488427 TOP2BQ02880 1626 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 FOXS1O43638 330 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 ENDOD1O94919 500 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 GPR3P46089 330 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 CDKN1CP49918 316 aaPredicted RBP5.78□□□□□ -1.48
ITGB1-214ENST00000488427 ICAM4Q14773 271 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 APBB1IPQ7Z5R6 666 aaPredicted RBP5.78□□□□□ -1.48
ITGB1-214ENST00000488427 LYSMD2Q8IV50 215 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 PIK3C3Q8NEB9 887 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 GPR156Q8NFN8 814 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 Q8TCH9 128 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 IL17RAQ96F46 866 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 ADOQ96SZ5 270 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 RBM12Q9NTZ6 932 aaKnown RBP5.78□□□□□ -1.48
ITGB1-214ENST00000488427 TRHDEQ9UKU6 1024 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 GIT1Q9Y2X7 761 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 TESMINQ9Y4I5 508 aa5.78□□□□□ -1.48
ITGB1-214ENST00000488427 KLHL33A6NCF5 533 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 CAPN14A8MX76 684 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 RPLP2P05387 115 aaKnown RBP5.77□□□□□ -1.49
ITGB1-214ENST00000488427 MYBL2P10244 700 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 HSP90B1P14625 803 aaKnown RBP5.77□□□□□ -1.49
ITGB1-214ENST00000488427 ACO1P21399 889 aaKnown RBP5.77□□□□□ -1.49
ITGB1-214ENST00000488427 CTSSP25774 331 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 GZMKP49863 264 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 PER3P56645 1201 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 SRSF2Q01130 221 aaKnown RBP5.77□□□□□ -1.49
ITGB1-214ENST00000488427 EXOSC10Q01780 885 aaKnown RBP5.77□□□□□ -1.49
ITGB1-214ENST00000488427 DUSP8Q13202 625 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 FAM50AQ14320 339 aaKnown RBP5.77□□□□□ -1.49
ITGB1-214ENST00000488427 UBE3CQ15386 1083 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 ADRM1Q16186 407 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 KCNK18Q7Z418 384 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 PNMA8AQ86V59 439 aaPredicted RBP5.77□□□□□ -1.49
ITGB1-214ENST00000488427 TMEM176AQ96HP8 235 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 UHRF1Q96T88 793 aaPredicted RBP5.77□□□□□ -1.49
ITGB1-214ENST00000488427 PDCD2LQ9BRP1 358 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 FAM126AQ9BYI3 521 aaPredicted RBP5.77□□□□□ -1.49
ITGB1-214ENST00000488427 CD248Q9HCU0 757 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 VTA1Q9NP79 307 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 ING3Q9NXR8 418 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 ST6GALNAC2Q9UJ37 374 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 TSC22D4Q9Y3Q8 395 aa5.77□□□□□ -1.49
ITGB1-214ENST00000488427 DIP2BQ9P265 1576 aa5.76□□□□□ -1.49
ITGB1-214ENST00000488427 GOLGA6L6A8MZA4 724 aa5.76□□□□□ -1.49
ITGB1-214ENST00000488427 TEX33O43247 280 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms