RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 NXF3Q9H4D5 531 aaKnown RBP18.8■□□□□ 0.6
HMG20B-212ENST00000487894 PDZD7Q9H5P4 517 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 C17orf75Q9HAS0 396 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 TBC1D13Q9NVG8 400 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 ARHGAP28Q9P2N2 729 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 USP20Q9Y2K6 914 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 HES2Q9Y543 173 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 CCDC169A6NNP5 214 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 N4BP3O15049 544 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 FGF18O76093 207 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 CSPG5O95196 566 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 YEATS4O95619 227 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 ITGA4P13612 1032 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 LIG1P18858 919 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 AFF1P51825 1210 aaKnown RBP18.79■□□□□ 0.6
HMG20B-212ENST00000487894 CACNB1Q02641 598 aaPredicted RBP18.79■□□□□ 0.6
HMG20B-212ENST00000487894 SKIV2LQ15477 1246 aaKnown RBP18.79■□□□□ 0.6
HMG20B-212ENST00000487894 TAS1R3Q7RTX0 852 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 GPBP1Q86WP2 473 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 THNSL1Q8IYQ7 743 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 POF1BQ8WVV4 589 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 LARP4BQ92615 738 aaKnown RBP18.79■□□□□ 0.6
HMG20B-212ENST00000487894 ZNF558Q96NG5 402 aa18.79■□□□□ 0.6
HMG20B-212ENST00000487894 TRIM6Q9C030 488 aaPredicted RBP18.79■□□□□ 0.6
HMG20B-212ENST00000487894 NSUN3Q9H649 340 aaKnown RBP18.79■□□□□ 0.6
HMG20B-212ENST00000487894 TFIP11Q9UBB9 837 aaKnown RBP18.79■□□□□ 0.6
HMG20B-212ENST00000487894 SFI1A8K8P3 1242 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 SPTLC2O15270 562 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 INPPL1O15357 1258 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 B4GALT3O60512 393 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 UBE3AQ05086 875 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 DHX8Q14562 1220 aaKnown RBP18.78■□□□□ 0.6
HMG20B-212ENST00000487894 FOXD4L6Q3SYB3 417 aaPredicted RBP18.78■□□□□ 0.6
HMG20B-212ENST00000487894 TCEAL5Q5H9L2 206 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 FOXD4L3Q6VB84 417 aaPredicted RBP18.78■□□□□ 0.6
HMG20B-212ENST00000487894 URGCPQ8TCY9 931 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 REEP2Q9BRK0 252 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 NRDE2Q9H7Z3 1164 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 UBN1Q9NPG3 1134 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 KMT5AQ9NQR1 393 aa18.78■□□□□ 0.6
HMG20B-212ENST00000487894 TCF20Q9UGU0 1960 aaKnown RBP18.78■□□□□ 0.6
HMG20B-212ENST00000487894 ZC3H11AO75152 810 aaKnown RBP eCLIP18.77■□□□□ 0.6
HMG20B-212ENST00000487894 PPP6R2O75170 966 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 PLS3P13797 630 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 IRS1P35568 1242 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 PPM1AP35813 382 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 TXLNAP40222 546 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 MLH1P40692 756 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 BCAR1P56945 870 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 PLCB3Q01970 1234 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 NT5DC1Q5TFE4 455 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 EEF1DP3Q658K8 133 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 SLC39A11Q8N1S5 342 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 SPIRE2Q8WWL2 714 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 APOL6Q9BWW8 343 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 TMEM134Q9H6X4 195 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 DNAJB4Q9UDY4 337 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 STK17AQ9UEE5 414 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 CCDC39Q9UFE4 941 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 ODF2LQ9ULJ1 636 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 ZMYM2Q9UBW7 1377 aa18.77■□□□□ 0.6
HMG20B-212ENST00000487894 A0A087X0B3 334 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 ARL5CA6NH57 179 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 K7ERI5 159 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 SLC16A4O15374 487 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 AKAP5P24588 427 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 RNASELQ05823 741 aaKnown RBP18.76■□□□□ 0.59
HMG20B-212ENST00000487894 TMEM132AQ24JP5 1023 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 ATF7IP2Q5U623 682 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 ZNF280BQ86YH2 543 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 HACE1Q8IYU2 909 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 MRPS27Q92552 414 aaKnown RBP18.76■□□□□ 0.59
HMG20B-212ENST00000487894 ZFP42Q96MM3 310 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 GAD1Q99259 594 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 NTPCRQ9BSD7 190 aaKnown RBP18.76■□□□□ 0.59
HMG20B-212ENST00000487894 GBP3Q9H0R5 595 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 SPG21Q9NZD8 308 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 LZTS1Q9Y250 596 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 GIT1Q9Y2X7 761 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 ZDHHC9Q9Y397 364 aa18.76■□□□□ 0.59
HMG20B-212ENST00000487894 RBM19Q9Y4C8 960 aaKnown RBP18.76■□□□□ 0.59
HMG20B-212ENST00000487894 NT5C1B-RDH14C9J2C7 533 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 DDHD2O94830 711 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 BRD1O95696 1058 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 POMCP01189 267 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 DDIT3P35638 169 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 SCNN1GP51170 649 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 ZNF131P52739 623 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 NCKAP1LP55160 1127 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 TFF2Q03403 129 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 GIT2Q14161 759 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 COL19A1Q14993 1142 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 TMEM173Q86WV6 379 aaPredicted RBP18.75■□□□□ 0.59
HMG20B-212ENST00000487894 TMEM161BQ8NDZ6 487 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 ATXN2LQ8WWM7 1075 aaKnown RBP18.75■□□□□ 0.59
HMG20B-212ENST00000487894 ADPGKQ9BRR6 497 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 TLR9Q9NR96 1032 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 MIOSQ9NXC5 875 aa18.75■□□□□ 0.59
HMG20B-212ENST00000487894 LARSQ9P2J5 1176 aaKnown RBP18.75■□□□□ 0.59
HMG20B-212ENST00000487894 COG5Q9UP83 839 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms