RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 FRMD7Q6ZUT3 714 aa5.78□□□□□ -1.48
CCDC66-221ENST00000487739 MSL3Q8N5Y2 521 aaKnown RBP5.78□□□□□ -1.48
CCDC66-221ENST00000487739 MLST8Q9BVC4 326 aa5.78□□□□□ -1.48
CCDC66-221ENST00000487739 CPEB1Q9BZB8 566 aaKnown RBP5.78□□□□□ -1.48
CCDC66-221ENST00000487739 EIF2B4Q9UI10 523 aaKnown RBP5.78□□□□□ -1.48
CCDC66-221ENST00000487739 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.78□□□□□ -1.48
CCDC66-221ENST00000487739 PPP2R3BQ9Y5P8 575 aa5.78□□□□□ -1.48
CCDC66-221ENST00000487739 LCHNA4D1U4 455 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 KDM1AO60341 852 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 RAB11FIP3O75154 756 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 RHOBTB3O94955 611 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 FKBP9O95302 570 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 NR4A1P22736 598 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 ADCYAP1R1P41586 468 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 MANFP55145 182 aaKnown RBP5.77□□□□□ -1.49
CCDC66-221ENST00000487739 TIGD2Q4W5G0 525 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 PLEKHG4Q58EX7 1191 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 IQSEC1Q6DN90 963 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 FKBP9P1Q75LS8 142 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 CRAMP1Q96RY5 1269 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 LSM14BQ9BX40 385 aaKnown RBP5.77□□□□□ -1.49
CCDC66-221ENST00000487739 KCNH6Q9H252 994 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 MS4A5Q9H3V2 200 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 KCNG1Q9UIX4 513 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 CLCA2Q9UQC9 943 aa5.77□□□□□ -1.49
CCDC66-221ENST00000487739 PRR5-ARHGAP8B1AHC4 643 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 GCP02774 474 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 HSP90B1P14625 803 aaKnown RBP5.76□□□□□ -1.49
CCDC66-221ENST00000487739 MEF2AQ02078 507 aaPredicted RBP5.76□□□□□ -1.49
CCDC66-221ENST00000487739 DDB1Q16531 1140 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 DALRD3Q5D0E6 543 aaKnown RBP5.76□□□□□ -1.49
CCDC66-221ENST00000487739 MBNL2Q5VZF2 373 aaKnown RBP5.76□□□□□ -1.49
CCDC66-221ENST00000487739 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 OR14C36Q8NHC7 312 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 NDC1Q9BTX1 674 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 SLC46A2Q9BY10 475 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 EMC7Q9NPA0 242 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 PRSS50Q9UI38 385 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 HS3ST4Q9Y661 456 aa5.76□□□□□ -1.49
CCDC66-221ENST00000487739 MRPL42Q9Y6G3 142 aaKnown RBP5.76□□□□□ -1.49
CCDC66-221ENST00000487739 PRAMEF4O60810 478 aa5.75□□□□□ -1.49
CCDC66-221ENST00000487739 LTA4HP09960 611 aaKnown RBP5.75□□□□□ -1.49
CCDC66-221ENST00000487739 LAG3P18627 525 aa5.75□□□□□ -1.49
CCDC66-221ENST00000487739 COL10A1Q03692 680 aa5.75□□□□□ -1.49
CCDC66-221ENST00000487739 VRK3Q8IV63 474 aa5.75□□□□□ -1.49
CCDC66-221ENST00000487739 DCLRE1CQ96SD1 692 aaKnown RBP5.75□□□□□ -1.49
CCDC66-221ENST00000487739 ANO3Q9BYT9 981 aa5.75□□□□□ -1.49
CCDC66-221ENST00000487739 EVLQ9UI08 416 aaPredicted RBP5.75□□□□□ -1.49
CCDC66-221ENST00000487739 TMPRSS11EQ9UL52 423 aa5.75□□□□□ -1.49
CCDC66-221ENST00000487739 B3GALT2O43825 422 aa5.74□□□□□ -1.49
CCDC66-221ENST00000487739 APOBEC3AP31941 199 aaPredicted RBP5.74□□□□□ -1.49
CCDC66-221ENST00000487739 UBE3CQ15386 1083 aa5.74□□□□□ -1.49
CCDC66-221ENST00000487739 BROXQ5VW32 411 aa5.74□□□□□ -1.49
CCDC66-221ENST00000487739 CCDC62Q6P9F0 684 aa5.74□□□□□ -1.49
CCDC66-221ENST00000487739 XYLT1Q86Y38 959 aa5.74□□□□□ -1.49
CCDC66-221ENST00000487739 SLC5A5Q92911 643 aa5.74□□□□□ -1.49
CCDC66-221ENST00000487739 MYEOVQ96EZ4 313 aa5.74□□□□□ -1.49
CCDC66-221ENST00000487739 CDC5LQ99459 802 aaKnown RBP5.74□□□□□ -1.49
CCDC66-221ENST00000487739 ZNF768Q9H5H4 540 aaKnown RBP5.74□□□□□ -1.49
CCDC66-221ENST00000487739 PACSIN3Q9UKS6 424 aa5.74□□□□□ -1.49
CCDC66-221ENST00000487739 NOC2LQ9Y3T9 749 aaKnown RBP5.74□□□□□ -1.49
CCDC66-221ENST00000487739 GSG1L2A8MUP6 293 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 AHRRA9YTQ3 701 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 CLEC2LP0C7M8 214 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 BMP5P22003 454 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 PROZP22891 400 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 APBA1Q02410 837 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 TRIM25Q14258 630 aaKnown RBP5.73□□□□□ -1.49
CCDC66-221ENST00000487739 GPRIN1Q7Z2K8 1008 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 GDF7Q7Z4P5 450 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 KIAA0907Q7Z7F0 614 aaPredicted RBP5.73□□□□□ -1.49
CCDC66-221ENST00000487739 JAZF1Q86VZ6 243 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 LYSMD2Q8IV50 215 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 SLC41A1Q8IVJ1 513 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 LEO1Q8WVC0 666 aaPredicted RBP5.73□□□□□ -1.49
CCDC66-221ENST00000487739 SPON1Q9HCB6 807 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 TRPM5Q9NZQ8 1165 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 CDY2AQ9Y6F7 541 aa5.73□□□□□ -1.49
CCDC66-221ENST00000487739 GRID2IPA4D2P6 1211 aa5.72□□□□□ -1.49
CCDC66-221ENST00000487739 B5MCH6 92 aa5.72□□□□□ -1.49
CCDC66-221ENST00000487739 RNASET2O00584 256 aaKnown RBP5.72□□□□□ -1.49
CCDC66-221ENST00000487739 ZFP36P26651 326 aaKnown RBP5.72□□□□□ -1.49
CCDC66-221ENST00000487739 ATP13A4Q4VNC1 1196 aa5.72□□□□□ -1.49
CCDC66-221ENST00000487739 C19orf54Q5BKX5 351 aa5.72□□□□□ -1.49
CCDC66-221ENST00000487739 PITRM1Q5JRX3 1037 aa5.72□□□□□ -1.49
CCDC66-221ENST00000487739 NPM2Q86SE8 214 aaKnown RBP5.72□□□□□ -1.49
CCDC66-221ENST00000487739 RASSF3Q86WH2 238 aa5.72□□□□□ -1.49
CCDC66-221ENST00000487739 LILRA3Q8N6C8 439 aaPredicted RBP5.72□□□□□ -1.49
CCDC66-221ENST00000487739 SNX33Q8WV41 574 aa5.72□□□□□ -1.49
CCDC66-221ENST00000487739 PAWRQ96IZ0 340 aaKnown RBP5.72□□□□□ -1.49
CCDC66-221ENST00000487739 KCTD10Q9H3F6 313 aa5.72□□□□□ -1.49
CCDC66-221ENST00000487739 CENPVL1A0A0U1RR11 272 aa5.71□□□□□ -1.5
CCDC66-221ENST00000487739 GAGE12BA1L429 117 aa5.71□□□□□ -1.5
CCDC66-221ENST00000487739 GAGE12HA6NDE8 117 aa5.71□□□□□ -1.5
CCDC66-221ENST00000487739 DIRC3C9JPN6 131 aa5.71□□□□□ -1.5
CCDC66-221ENST00000487739 PDE8AO60658 829 aa5.71□□□□□ -1.5
CCDC66-221ENST00000487739 TMEM127O75204 238 aa5.71□□□□□ -1.5
CCDC66-221ENST00000487739 ITGA10O75578 1167 aa5.71□□□□□ -1.5
CCDC66-221ENST00000487739 LMNAP02545 664 aaKnown RBP5.71□□□□□ -1.5
CCDC66-221ENST00000487739 MGAT1P26572 445 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms