RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MBTD1Q05BQ5 628 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 CAPSQ13938 189 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 TRIM29Q14134 588 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 TFDP1Q14186 410 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 PCBP1Q15365 356 aaKnown RBP eCLIP13.57□□□□□ -0.24
VPS16-208ENST00000487461 ATAT1Q5SQI0 421 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 TAS1R1Q7RTX1 841 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 COLGALT2Q8IYK4 626 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 FBXL6Q8N531 539 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 RIPOR3Q96MK2 946 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 GAD1Q99259 594 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 CSRNP2Q9H175 543 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 UBN1Q9NPG3 1134 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 DZANK1Q9NVP4 752 aa13.57□□□□□ -0.24
VPS16-208ENST00000487461 ARL5CA6NH57 179 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 INPPL1O15357 1258 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 CNPP09543 421 aaKnown RBP13.56□□□□□ -0.24
VPS16-208ENST00000487461 ARF4P18085 180 aaPredicted RBP13.56□□□□□ -0.24
VPS16-208ENST00000487461 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 KLRC2P26717 231 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 MCM7P33993 719 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 GUCY1B3Q02153 619 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
VPS16-208ENST00000487461 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 KIAA1841Q6NSI8 718 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 NOTUMQ6P988 496 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 CABP7Q86V35 215 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 PPFIBP1Q86W92 1011 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 KREMEN2Q8NCW0 462 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 PRSS33Q8NF86 280 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 CCDC51Q96ER9 411 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 POLR3FQ9H1D9 316 aaPredicted RBP13.56□□□□□ -0.24
VPS16-208ENST00000487461 MARCH5Q9NX47 278 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 ZDBF2Q9HCK1 2354 aa13.56□□□□□ -0.24
VPS16-208ENST00000487461 MYO10Q9HD67 2058 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 POTEMA6NI47 508 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 B4GALT5O43286 388 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 MLH1P40692 756 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 OR1G1P47890 313 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 SCNN1GP51170 649 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 CLCN4P51793 760 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 DSC1Q08554 894 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 TMC5Q6UXY8 1006 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 MAEAQ7L5Y9 396 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 ZBTB33Q86T24 672 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 CDR2LQ86X02 465 aaPredicted RBP13.55□□□□□ -0.24
VPS16-208ENST00000487461 CATSPER3Q86XQ3 398 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 SUGP1Q8IWZ8 645 aaKnown RBP13.55□□□□□ -0.24
VPS16-208ENST00000487461 ZFP42Q96MM3 310 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 APOL6Q9BWW8 343 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 EMILIN2Q9BXX0 1053 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 NFKBIZQ9BYH8 718 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 GPRC5CQ9NQ84 441 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 MRPL17Q9NRX2 175 aaKnown RBP13.55□□□□□ -0.24
VPS16-208ENST00000487461 STK39Q9UEW8 545 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 LIMD1Q9UGP4 676 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 GIT1Q9Y2X7 761 aa13.55□□□□□ -0.24
VPS16-208ENST00000487461 PRG3Q9Y2Y8 225 aaPredicted RBP13.55□□□□□ -0.24
VPS16-208ENST00000487461 A0A1B0GUA9 196 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 F8W810 466 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 C2CD2LO14523 706 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 USO1O60763 962 aaKnown RBP13.54□□□□□ -0.24
VPS16-208ENST00000487461 MED24O75448 989 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 EFEMP2O95967 443 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 PDGFBP01127 241 aaPredicted RBP13.54□□□□□ -0.24
VPS16-208ENST00000487461 SOD2P04179 222 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 ASGR2P07307 311 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 AKAP5P24588 427 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 MRE11P49959 708 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 VCPP55072 806 aaKnown RBP13.54□□□□□ -0.24
VPS16-208ENST00000487461 ZNF174Q15697 407 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 GPR149Q86SP6 731 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 ZDHHC14Q8IZN3 488 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 GSTCDQ8NEC7 633 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 HERC2P3Q9BVR0 1158 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 SMOC2Q9H3U7 446 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 NXF3Q9H4D5 531 aaKnown RBP13.54□□□□□ -0.24
VPS16-208ENST00000487461 TUFT1Q9NNX1 390 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 DBR1Q9UK59 544 aaKnown RBP13.54□□□□□ -0.24
VPS16-208ENST00000487461 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
VPS16-208ENST00000487461 EIF5BO60841 1220 aaKnown RBP13.53□□□□□ -0.24
VPS16-208ENST00000487461 NPTXRO95502 500 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 BRD1O95696 1058 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 AVPR2P30518 371 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 TCF15Q12870 199 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 SAFBQ15424 915 aaKnown RBP eCLIP13.53□□□□□ -0.24
VPS16-208ENST00000487461 KIAA0319Q5VV43 1072 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 RNF168Q8IYW5 571 aaPredicted RBP13.53□□□□□ -0.24
VPS16-208ENST00000487461 CCDC43Q96MW1 224 aaKnown RBP13.53□□□□□ -0.24
VPS16-208ENST00000487461 NACC1Q96RE7 527 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 RPS6KC1Q96S38 1066 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 PHOX2BQ99453 314 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
VPS16-208ENST00000487461 TRIM6Q9C030 488 aaPredicted RBP13.53□□□□□ -0.24
VPS16-208ENST00000487461 SFXN1Q9H9B4 322 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 KLK14Q9P0G3 267 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 SORCS3Q9UPU3 1222 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 USTQ9Y2C2 406 aa13.53□□□□□ -0.24
VPS16-208ENST00000487461 LRRIQ4A6NIV6 560 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms