RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 KIFAP3Q92845 792 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 OSGEPQ9NPF4 335 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 TMEM51Q9NW97 253 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 IGSF9BQ9UPX0 1349 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 FOXN3O00409 490 aaPredicted RBP28.19■■■□□ 2.1
HLA-C-208ENST00000487245 ITGA4P13612 1032 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 PTPRAP18433 802 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 DSG3P32926 999 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 DLG4P78352 724 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 PPP3CAQ08209 521 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 UAP1Q16222 522 aaPredicted RBP28.19■■■□□ 2.1
HLA-C-208ENST00000487245 KCTD16Q68DU8 428 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 RHOT2Q8IXI1 618 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 NSUN6Q8TEA1 469 aaKnown RBP28.19■■■□□ 2.1
HLA-C-208ENST00000487245 SPIRE2Q8WWL2 714 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 CDHR1Q96JP9 859 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 RNPC3Q96LT9 517 aaKnown RBP28.19■■■□□ 2.1
HLA-C-208ENST00000487245 ADAMTS5Q9UNA0 930 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 PFASO15067 1338 aa28.18■■■□□ 2.1
HLA-C-208ENST00000487245 PDCLQ13371 301 aa28.18■■■□□ 2.1
HLA-C-208ENST00000487245 APOBEC3FQ8IUX4 373 aaKnown RBP28.18■■■□□ 2.1
HLA-C-208ENST00000487245 ATP6V0A1Q93050 837 aa28.18■■■□□ 2.1
HLA-C-208ENST00000487245 NEUROG2Q9H2A3 272 aa28.18■■■□□ 2.1
HLA-C-208ENST00000487245 TBX20Q9UMR3 447 aa28.18■■■□□ 2.1
HLA-C-208ENST00000487245 BRCA1P38398 1863 aaKnown RBP28.18■■■□□ 2.1
HLA-C-208ENST00000487245 FZD9O00144 591 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 STAM2O75886 525 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 PTENP60484 403 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 DMP1Q13316 513 aaPredicted RBP28.17■■■□□ 2.1
HLA-C-208ENST00000487245 CEP85LQ5SZL2 805 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 C1orf220Q5T0J3 134 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 SPATS2Q86XZ4 545 aaKnown RBP28.17■■■□□ 2.1
HLA-C-208ENST00000487245 ARFGAP2Q8N6H7 521 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 NTPCRQ9BSD7 190 aaKnown RBP28.17■■■□□ 2.1
HLA-C-208ENST00000487245 PAGR1Q9BTK6 254 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 GJA3Q9Y6H8 435 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 GOLGA6L10A6NI86 522 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 ATP2A1O14983 1001 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 GCLMP48507 274 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 MXI1P50539 228 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 BIRC3Q13489 604 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 C11orf63Q6NUN7 778 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 MAP4K3Q8IVH8 894 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 TMEM161BQ8NDZ6 487 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 PPM1EQ8WY54 764 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 ARHGEF26Q96DR7 871 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 GPRC5CQ9NQ84 441 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 AMACRQ9UHK6 382 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 RIPK3Q9Y572 518 aa28.17■■■□□ 2.1
HLA-C-208ENST00000487245 NFASCO94856 1347 aa28.16■■■□□ 2.1
HLA-C-208ENST00000487245 A0A087WUV0 522 aaPredicted RBP28.16■■■□□ 2.1
HLA-C-208ENST00000487245 TISP43B9A030 160 aa28.16■■■□□ 2.1
HLA-C-208ENST00000487245 CPP00450 1065 aa28.16■■■□□ 2.1
HLA-C-208ENST00000487245 ENPEPQ07075 957 aa28.16■■■□□ 2.1
HLA-C-208ENST00000487245 PTPROQ16827 1216 aa28.16■■■□□ 2.1
HLA-C-208ENST00000487245 AGBL2Q5U5Z8 902 aa28.16■■■□□ 2.1
HLA-C-208ENST00000487245 SNRNP48Q6IEG0 339 aaKnown RBP28.16■■■□□ 2.1
HLA-C-208ENST00000487245 RUFY4Q6ZNE9 571 aa28.16■■■□□ 2.1
HLA-C-208ENST00000487245 DDX42Q86XP3 938 aaKnown RBP eCLIP28.16■■■□□ 2.1
HLA-C-208ENST00000487245 RAB17Q9H0T7 212 aa28.16■■■□□ 2.1
HLA-C-208ENST00000487245 EPN3Q9H201 632 aa28.16■■■□□ 2.1
HLA-C-208ENST00000487245 CCDC169A6NNP5 214 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 FGGP02679 453 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 PSAPP07602 524 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 MYZAPP0CAP1 466 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 LSP1P33241 339 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 ABCD1P33897 745 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 NPTX2P47972 431 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 DCAF12L1Q5VU92 463 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 PLA2G4FQ68DD2 849 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 B4GALNT4Q76KP1 1039 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 WRNIP1Q96S55 665 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 KMT5AQ9NQR1 393 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 UTP11Q9Y3A2 253 aaKnown RBP28.15■■■□□ 2.1
HLA-C-208ENST00000487245 TMEM150BA6NC51 233 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 MIF4GDA9UHW6 222 aaKnown RBP28.15■■■□□ 2.1
HLA-C-208ENST00000487245 TTI1O43156 1089 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 DAPK3O43293 454 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 MDH1P40925 334 aaKnown RBP28.15■■■□□ 2.1
HLA-C-208ENST00000487245 ATP1A2P50993 1020 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 ANO5Q75V66 913 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 USP37Q86T82 979 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 CCDC125Q86Z20 511 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 ARHGEF19Q8IW93 802 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 TMC2Q8TDI7 906 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 TMEM117Q9H0C3 514 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 THAP2Q9H0W7 228 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.15■■■□□ 2.1
HLA-C-208ENST00000487245 KCNG1Q9UIX4 513 aa28.15■■■□□ 2.1
HLA-C-208ENST00000487245 FAM187AA6NFU0 413 aa28.14■■■□□ 2.1
HLA-C-208ENST00000487245 ZBTB7AO95365 584 aa28.14■■■□□ 2.1
HLA-C-208ENST00000487245 RTP1P59025 263 aa28.14■■■□□ 2.1
HLA-C-208ENST00000487245 ZNF844Q08AG5 666 aa28.14■■■□□ 2.1
HLA-C-208ENST00000487245 SEPT11Q9NVA2 429 aaKnown RBP28.14■■■□□ 2.1
HLA-C-208ENST00000487245 TAS2R14Q9NYV8 317 aa28.14■■■□□ 2.1
HLA-C-208ENST00000487245 GABBR1Q9UBS5 961 aa28.14■■■□□ 2.1
HLA-C-208ENST00000487245 PHIPQ8WWQ0 1821 aa28.14■■■□□ 2.1
HLA-C-208ENST00000487245 LRRN2O75325 713 aa28.13■■■□□ 2.09
HLA-C-208ENST00000487245 KCNA2P16389 499 aa28.13■■■□□ 2.09
HLA-C-208ENST00000487245 HSPA6P17066 643 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms