RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ANKRD54Q6NXT1 300 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 PPP4R3CPQ6ZMV5 832 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 HACE1Q8IYU2 909 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 IGSF22Q8N9C0 903 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 SUSD6Q92537 303 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 CASP10Q92851 521 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 PRIMPOLQ96LW4 560 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 LRFN3Q9BTN0 628 aa21.15■□□□□ 0.98
CLIP2-206ENST00000487091 PRMT7Q9NVM4 692 aaPredicted RBP21.15■□□□□ 0.98
CLIP2-206ENST00000487091 B4GALT3O60512 393 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 PRPHP41219 470 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 FAM187BQ17R55 369 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 SLC27A1Q6PCB7 646 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 ZBTB8OSQ8IWT0 167 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 BCL7CQ8WUZ0 217 aaPredicted RBP21.14■□□□□ 0.97
CLIP2-206ENST00000487091 TBC1D32Q96NH3 1257 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 TRIM6Q9C030 488 aaPredicted RBP21.14■□□□□ 0.97
CLIP2-206ENST00000487091 C2orf40Q9H1Z8 148 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 S1PR5Q9H228 398 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 RNF39Q9H2S5 420 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 FZD8Q9H461 694 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 FAN1Q9Y2M0 1017 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 GIT1Q9Y2X7 761 aa21.14■□□□□ 0.97
CLIP2-206ENST00000487091 ARL5CA6NH57 179 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 B4GALT5O43286 388 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 DCXO43602 365 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 CLASP2O75122 1294 aaKnown RBP21.13■□□□□ 0.97
CLIP2-206ENST00000487091 CD2BP2O95400 341 aaKnown RBP21.13■□□□□ 0.97
CLIP2-206ENST00000487091 POMCP01189 267 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 ECM1Q16610 540 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 RILPL1Q5EBL4 403 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 SYCE2Q6PIF2 218 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 GAD1Q99259 594 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 PHF7Q9BWX1 381 aaPredicted RBP21.13■□□□□ 0.97
CLIP2-206ENST00000487091 C11orf16Q9NQ32 467 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.13■□□□□ 0.97
CLIP2-206ENST00000487091 HES2Q9Y543 173 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 HCFC2Q9Y5Z7 792 aa21.13■□□□□ 0.97
CLIP2-206ENST00000487091 NRP1O14786 923 aa21.12■□□□□ 0.97
CLIP2-206ENST00000487091 GJB2P29033 226 aa21.12■□□□□ 0.97
CLIP2-206ENST00000487091 NAMPTP43490 491 aa21.12■□□□□ 0.97
CLIP2-206ENST00000487091 PPP2R5AQ15172 486 aa21.12■□□□□ 0.97
CLIP2-206ENST00000487091 MCTP1Q6DN14 999 aa21.12■□□□□ 0.97
CLIP2-206ENST00000487091 LLGL2Q6P1M3 1020 aa21.12■□□□□ 0.97
CLIP2-206ENST00000487091 SNX29Q8TEQ0 813 aa21.12■□□□□ 0.97
CLIP2-206ENST00000487091 BHMT2Q9H2M3 363 aa21.12■□□□□ 0.97
CLIP2-206ENST00000487091 DAXXQ9UER7 740 aaPredicted RBP21.12■□□□□ 0.97
CLIP2-206ENST00000487091 KIAA1024Q9UPX6 916 aa21.12■□□□□ 0.97
CLIP2-206ENST00000487091 ZMYM2Q9UBW7 1377 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.11■□□□□ 0.97
CLIP2-206ENST00000487091 LOC730098B7Z3J9 87 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 MLH1P40692 756 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 DSC1Q08554 894 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 TPRNQ4KMQ1 711 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 KRT79Q5XKE5 535 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 DTHD1Q6ZMT9 781 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 COLGALT2Q8IYK4 626 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 TMEM87AQ8NBN3 555 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 BSNDQ8WZ55 320 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 VN1R3Q9BXE9 311 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 NXF3Q9H4D5 531 aaKnown RBP21.11■□□□□ 0.97
CLIP2-206ENST00000487091 DDX19AQ9NUU7 478 aaKnown RBP21.11■□□□□ 0.97
CLIP2-206ENST00000487091 MIOSQ9NXC5 875 aa21.11■□□□□ 0.97
CLIP2-206ENST00000487091 TDRD15B5MCY1 1934 aaKnown RBP21.1■□□□□ 0.97
CLIP2-206ENST00000487091 H3BQV1 296 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 NPTXRO95502 500 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 CA8P35219 290 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 CBX2Q14781 532 aaPredicted RBP21.1■□□□□ 0.97
CLIP2-206ENST00000487091 MAPK6Q16659 721 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 HERC4Q5GLZ8 1057 aaPredicted RBP21.1■□□□□ 0.97
CLIP2-206ENST00000487091 RNF135Q8IUD6 432 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 DEPTORQ8TB45 409 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 KIFAP3Q92845 792 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 IFT74Q96LB3 600 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 ZFP42Q96MM3 310 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 DNM3Q9UQ16 869 aa21.1■□□□□ 0.97
CLIP2-206ENST00000487091 ACKR2O00590 384 aa21.09■□□□□ 0.97
CLIP2-206ENST00000487091 N4BP3O15049 544 aa21.09■□□□□ 0.97
CLIP2-206ENST00000487091 SCNN1GP51170 649 aa21.09■□□□□ 0.97
CLIP2-206ENST00000487091 IL17AQ16552 155 aa21.09■□□□□ 0.97
CLIP2-206ENST00000487091 PPFIBP1Q86W92 1011 aa21.09■□□□□ 0.97
CLIP2-206ENST00000487091 CDR2LQ86X02 465 aaPredicted RBP21.09■□□□□ 0.97
CLIP2-206ENST00000487091 AUTS2Q8WXX7 1259 aa21.09■□□□□ 0.97
CLIP2-206ENST00000487091 APOL6Q9BWW8 343 aa21.09■□□□□ 0.97
CLIP2-206ENST00000487091 CCDC113Q9H0I3 377 aa21.09■□□□□ 0.97
CLIP2-206ENST00000487091 SMC3Q9UQE7 1217 aa21.09■□□□□ 0.97
CLIP2-206ENST00000487091 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.09■□□□□ 0.97
CLIP2-206ENST00000487091 FAM86C2PA6NEL3 165 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 PRR33A8MZF0 331 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 NR1I2O75469 434 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 PRKCBP05771 671 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 AKAP5P24588 427 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 OR1G1P47890 313 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 EFNA5P52803 228 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 ATP2C1P98194 919 aaPredicted RBP21.08■□□□□ 0.97
CLIP2-206ENST00000487091 ITIH3Q06033 890 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 PRPF4BQ13523 1007 aaKnown RBP21.08■□□□□ 0.97
CLIP2-206ENST00000487091 PTPN14Q15678 1187 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 GSTCDQ8NEC7 633 aa21.08■□□□□ 0.97
CLIP2-206ENST00000487091 SLC22A17Q8WUG5 538 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms