RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 TCF7L2Q9NQB0 619 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 OLA1Q9NTK5 396 aaKnown RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 PPP4R2Q9NY27 417 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 CLIP2Q9UDT6 1046 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 LAMP5Q9UJQ1 280 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 PNMA3Q9UL41 463 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 LRFN2Q9ULH4 789 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 GABRQQ9UN88 632 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 DNM3Q9UQ16 869 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 APOBEC2Q9Y235 224 aaKnown RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 N6AMT1Q9Y5N5 214 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 MYO18BQ8IUG5 2567 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 MYPNQ86TC9 1320 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 ADGRA2Q96PE1 1338 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 NUP98P52948 1817 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 CCDC196A0A1B0GTZ2 297 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 LINC00854A0A1B0GVQ3 168 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 F5H0A9 414 aaPredicted RBP6.07□□□□□ -1.44
SF1-217ENST00000486960 HOXC11O43248 304 aaPredicted RBP6.07□□□□□ -1.44
SF1-217ENST00000486960 TSPAN3O60637 253 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 GADD45BO75293 160 aaPredicted RBP6.07□□□□□ -1.44
SF1-217ENST00000486960 TBX18O95935 607 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 INHAP05111 366 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 DHRS4L1P0CG22 281 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 ATP4AP20648 1035 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 ATP5F1P24539 256 aaPredicted RBP6.07□□□□□ -1.44
SF1-217ENST00000486960 TMOD1P28289 359 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 HOXC12P31275 282 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 PPM1AP35813 382 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 HNF4AP41235 474 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 MAGEA8P43361 318 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 MCM2P49736 904 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 CENPCQ03188 943 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 PRKCZQ05513 592 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 CAMK2GQ13555 558 aaPredicted RBP6.07□□□□□ -1.44
SF1-217ENST00000486960 BLMHQ13867 455 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 RABEP1Q15276 862 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 SYCP1Q15431 976 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 FAM26DQ5JW98 314 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 FKBP15Q5T1M5 1219 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 IFIT1BQ5T764 474 aaKnown RBP6.07□□□□□ -1.44
SF1-217ENST00000486960 LRCH2Q5VUJ6 765 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 GPR139Q6DWJ6 353 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 MRM1Q6IN84 353 aaKnown RBP6.07□□□□□ -1.44
SF1-217ENST00000486960 LLGL2Q6P1M3 1020 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 KRT74Q7RTS7 529 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 CCDC116Q8IYX3 515 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 FBXO30Q8TB52 745 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 UCMAQ8WVF2 138 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 TATDN2Q93075 761 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 ASIC4Q96FT7 647 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 RNF38Q9H0F5 515 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 GGNBP2Q9H3C7 697 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 KCTD10Q9H3F6 313 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 XAB2Q9HCS7 855 aaKnown RBP6.07□□□□□ -1.44
SF1-217ENST00000486960 WASH6PQ9NQA3 447 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 PLSCR4Q9NRQ2 329 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 TMOD4Q9NZQ9 345 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 SLC13A4Q9UKG4 626 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 ANGEL1Q9UNK9 670 aaKnown RBP6.07□□□□□ -1.44
SF1-217ENST00000486960 TRAF3IP3Q9Y228 551 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 DAGLAQ9Y4D2 1042 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 RLFQ13129 1914 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 COL4A3Q01955 1670 aa6.07□□□□□ -1.44
SF1-217ENST00000486960 GOLGA8CPA6NN73 597 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 FAM177BA6PVY3 158 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 M0QX08 132 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 SART1O43290 800 aaKnown RBP6.06□□□□□ -1.44
SF1-217ENST00000486960 ZBTB43O43298 467 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 PRKD3O94806 890 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 SASH1O94885 1247 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 SNX4O95219 450 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 TGDSO95455 350 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 STARD3NLO95772 234 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 MT-CO1P00395 513 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 HRGP04196 525 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 CAPNS1P04632 268 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 MMEP08473 750 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 BPIP17213 487 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 ATP5DP30049 168 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 IL6STP40189 918 aaPredicted RBP6.06□□□□□ -1.44
SF1-217ENST00000486960 SLC12A2P55011 1212 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 DRG2P55039 364 aaKnown RBP6.06□□□□□ -1.44
SF1-217ENST00000486960 PRMT2P55345 433 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 POLR2FP61218 127 aaKnown RBP6.06□□□□□ -1.44
SF1-217ENST00000486960 DCAF7P61962 342 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 ICA1Q05084 483 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 ZBTB16Q05516 673 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 PDE4BQ07343 736 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 AP1B1Q10567 949 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 FAPQ12884 760 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 SLC39A6Q13433 755 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 ARHGEF6Q15052 776 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 OASLQ15646 514 aaKnown RBP6.06□□□□□ -1.44
SF1-217ENST00000486960 RABL6Q3YEC7 729 aaPredicted RBP6.06□□□□□ -1.44
SF1-217ENST00000486960 CFAP100Q494V2 611 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 VWA3BQ502W6 1294 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 DGKKQ5KSL6 1271 aa6.06□□□□□ -1.44
SF1-217ENST00000486960 EP400NLQ6ZTU2 488 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms