RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 HAO1Q9UJM8 370 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 C15orf41Q9Y2V0 281 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 USP15Q9Y4E8 981 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-211ENST00000486901 CCDC88AQ3V6T2 1871 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SHMT1P34896 483 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 ADCY8P40145 1251 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 PRKCIP41743 596 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 EIF3BP55884 814 aaKnown RBP13.29□□□□□ -0.28
HSPG2-211ENST00000486901 LACTB2Q53H82 288 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-211ENST00000486901 C10orf76Q5T2E6 689 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SYCP2LQ5T4T6 812 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 KAZNQ674X7 775 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 BZW1Q7L1Q6 419 aaKnown RBP13.29□□□□□ -0.28
HSPG2-211ENST00000486901 VSIG1Q86XK7 387 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 ZNF653Q96CK0 615 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 ACSF2Q96CM8 615 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SAAL1Q96ER3 474 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 PI4K2AQ9BTU6 479 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 NUP85Q9BW27 656 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 ZCWPW1Q9H0M4 648 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 KCNMB3Q9NPA1 279 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 INTUQ9ULD6 942 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 PHF2O75151 1096 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 CLK2P49760 499 aaKnown RBP13.29□□□□□ -0.28
HSPG2-211ENST00000486901 PPP3CAQ08209 521 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SEMA3FQ13275 785 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 GRAPQ13588 217 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 TLDC1Q6P9B6 456 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 RNF207Q6ZRF8 634 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 OLIG1Q8TAK6 271 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 GRAPLQ8TC17 118 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-211ENST00000486901 STK33Q9BYT3 514 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 ATP6V0A4Q9HBG4 840 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SLC12A4Q9UP95 1085 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SUGT1Q9Y2Z0 365 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 A0A1W2PRG0 241 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 GOLGA8SH3BPF8 625 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 GOLGA8MH3BSY2 632 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 PAEPP09466 180 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 TMEM253P0C7T8 217 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 MARSP56192 900 aaKnown RBP13.29□□□□□ -0.28
HSPG2-211ENST00000486901 NBPF20Q3BBV1 942 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SGO2Q562F6 1265 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 C6orf118Q5T5N4 469 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 UBL4BQ8N7F7 174 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SUPT20HQ8NEM7 779 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SLC5A5Q92911 643 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 APEX2Q9UBZ4 518 aa13.29□□□□□ -0.28
HSPG2-211ENST00000486901 SMCHD1A6NHR9 2005 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 MGAT5Q09328 741 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 PASD1Q8IV76 773 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 CERS5Q8N5B7 392 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 KLF6Q99612 283 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-211ENST00000486901 TXLNGYQ9BZA5 131 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 CARD9Q9H257 536 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 DNAJC18Q9H819 358 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 GPRC5CQ9NQ84 441 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 NARFQ9UHQ1 456 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 USP21Q9UK80 565 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 ROBO1Q9Y6N7 1651 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 STRCP1A6NGW2 1772 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 K7ENM7 598 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 C21orf2O43822 256 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 BANF1O75531 89 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 CBX6O95503 412 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 KRT5P13647 590 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 RPA1P27694 616 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 COILP38432 576 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-211ENST00000486901 PDE6CP51160 858 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 TAF11Q15544 211 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 GNPTABQ3T906 1256 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 THEMIS2Q5TEJ8 643 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 SPATA21Q7Z572 469 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 ETNPPLQ8TBG4 499 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 ERP27Q96DN0 273 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 ZSWIM1Q9BR11 485 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 NSRP1Q9H0G5 558 aaKnown RBP13.28□□□□□ -0.28
HSPG2-211ENST00000486901 C10orf88Q9H8K7 445 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 METTL5Q9NRN9 209 aaKnown RBP13.28□□□□□ -0.28
HSPG2-211ENST00000486901 AGPAT3Q9NRZ7 376 aa13.28□□□□□ -0.28
HSPG2-211ENST00000486901 R3HDM2Q9Y2K5 976 aaKnown RBP13.28□□□□□ -0.28
HSPG2-211ENST00000486901 CCDC189A1A4V9 331 aa13.27□□□□□ -0.28
HSPG2-211ENST00000486901 SUN1O94901 812 aa13.27□□□□□ -0.28
HSPG2-211ENST00000486901 MSH2P43246 934 aa13.27□□□□□ -0.28
HSPG2-211ENST00000486901 VSTM1Q6UX27 236 aa13.27□□□□□ -0.28
HSPG2-211ENST00000486901 METTL14Q9HCE5 456 aaKnown RBP13.27□□□□□ -0.28
HSPG2-211ENST00000486901 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 PI4K2BG5E9Z4 385 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 GOLGA8RI6L899 631 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 ITGA8P53708 1063 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 COPS2P61201 443 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 ADCY2Q08462 1091 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 NOP9Q86U38 636 aaKnown RBP13.27□□□□□ -0.29
HSPG2-211ENST00000486901 DBNDD1Q9H9R9 158 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 DCTN4Q9UJW0 460 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 ECEL1O95672 775 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms