RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 DBF4BQ8NFT6 615 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 CYP2W1Q8TAV3 490 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 EXOC4Q96A65 974 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 MXRA8Q9BRK3 442 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 DESI2Q9BSY9 194 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 PARD6BQ9BYG5 372 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 ANO3Q9BYT9 981 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 RAB34Q9BZG1 259 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 GLT8D2Q9H1C3 349 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 MRPL44Q9H9J2 332 aaKnown RBP9.88□□□□□ -0.83
COL12A1-208ENST00000486533 C6orf50Q9HD87 102 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 JPH1Q9HDC5 661 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-208ENST00000486533 KCNH7Q9NS40 1196 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 EXOC1Q9NV70 894 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 TMEM260Q9NX78 707 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 ERAP1Q9NZ08 941 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 RAB21Q9UL25 225 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 PRRC2BQ5JSZ5 2229 aaKnown RBP9.88□□□□□ -0.83
COL12A1-208ENST00000486533 MICAL3Q7RTP6 2002 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 GSTTP1A0A1W2PQM5 241 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 LCHNA4D1U4 455 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 TEX33O43247 280 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 RHOBTB3O94955 611 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 ARHGEF15O94989 841 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 OAS2P29728 719 aaKnown RBP9.88□□□□□ -0.83
COL12A1-208ENST00000486533 KRT9P35527 623 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 ZNF76P36508 570 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 CCT6AP40227 531 aaKnown RBP9.88□□□□□ -0.83
COL12A1-208ENST00000486533 GOLGA8FQ08AF8 430 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 GOLGA8DPQ0D2H9 430 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 PPFIA1Q13136 1202 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 AP3B2Q13367 1082 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 LONRF2Q1L5Z9 754 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 CEP55Q53EZ4 464 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 COBLL1Q53SF7 1204 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 CNNM4Q6P4Q7 775 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 RAD9BQ6WBX8 426 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 TEX2Q8IWB9 1127 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 MYOCDQ8IZQ8 938 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 ADSSL1Q8N142 457 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 CPLX3Q8WVH0 158 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 CALML4Q96GE6 196 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 SMARCAD1Q9H4L7 1026 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 AZI2Q9H6S1 392 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 MED4Q9NPJ6 270 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 PRDM6Q9NQX0 595 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 SLC9A2Q9UBY0 812 aa9.88□□□□□ -0.83
COL12A1-208ENST00000486533 A0A087X0B3 334 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 A0A1W2PQJ5 194 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 ANO9A1A5B4 782 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 SLC26A4O43511 780 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 USO1O60763 962 aaKnown RBP9.87□□□□□ -0.83
COL12A1-208ENST00000486533 CAND2O75155 1236 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 GJB5O95377 273 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 SREBF1P36956 1147 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 CDK17Q00537 523 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 SKIV2LQ15477 1246 aaKnown RBP9.87□□□□□ -0.83
COL12A1-208ENST00000486533 NPY5RQ15761 445 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 GRIK4Q16099 956 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 TMEM266Q2M3C6 531 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 PLEKHG4Q58EX7 1191 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 FIGNQ5HY92 759 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 TAF2Q6P1X5 1199 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL12A1-208ENST00000486533 KIAA1328Q86T90 577 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 SLC35F6Q8N357 371 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 SEPT8Q92599 483 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 DNAJC7Q99615 494 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 RAD9AQ99638 391 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 NAP1L4Q99733 375 aaKnown RBP9.87□□□□□ -0.83
COL12A1-208ENST00000486533 UBXN6Q9BZV1 441 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 VIPAS39Q9H9C1 493 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 LUC7LQ9NQ29 371 aaKnown RBP9.87□□□□□ -0.83
COL12A1-208ENST00000486533 TAB2Q9NYJ8 693 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 THEGQ9P2T0 379 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 MTUS1Q9ULD2 1270 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 MYO6Q9UM54 1294 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 CAPN11Q9UMQ6 739 aa9.87□□□□□ -0.83
COL12A1-208ENST00000486533 EPN1Q9Y6I3 576 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-208ENST00000486533 TARSL2A2RTX5 802 aaKnown RBP9.86□□□□□ -0.83
COL12A1-208ENST00000486533 EPOPA6NHQ4 379 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 DDX39AO00148 427 aaKnown RBP9.86□□□□□ -0.83
COL12A1-208ENST00000486533 NDUFA10O95299 355 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 AMHP03971 560 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 IVLP07476 585 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 OR52Z1P0C646 297 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 ARP10275 920 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 CCNE1P24864 410 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 CLK2P49760 499 aaKnown RBP9.86□□□□□ -0.83
COL12A1-208ENST00000486533 ACTR2P61160 394 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 IGBP1P78318 339 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 ADAM17P78536 824 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 NONOQ15233 471 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL12A1-208ENST00000486533 TJAP1Q5JTD0 557 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 WDR93Q6P2C0 686 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 FOXR2Q6PJQ5 311 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 LEKR1Q6ZMV7 388 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 RUFY4Q6ZNE9 571 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 SPRED2Q7Z698 418 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 RSPH3Q86UC2 560 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms