RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 GTF2H1P32780 548 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 RFC5P40937 340 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 MEI1Q5TIA1 1274 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 CCDC181Q5TID7 509 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 KRT39Q6A163 491 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 KCNV1Q6PIU1 500 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 METTL7BQ6UX53 244 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 TAS1R3Q7RTX0 852 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 GPD1LQ8N335 351 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 U2AF1L4Q8WU68 220 aaKnown RBP22.06■■□□□ 1.12
HPS3-206ENST00000486530 SLC7A3Q8WY07 619 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 GBA2Q9HCG7 927 aaPredicted RBP22.06■■□□□ 1.12
HPS3-206ENST00000486530 TMEM8AQ9HCN3 771 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 RNF14Q9UBS8 474 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 NAMPTP43490 491 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 ARHGEF19Q8IW93 802 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 NRBP2Q9NSY0 501 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 LRRIQ3A6PVS8 624 aaPredicted RBP22.05■■□□□ 1.12
HPS3-206ENST00000486530 FOXN3O00409 490 aaPredicted RBP22.05■■□□□ 1.12
HPS3-206ENST00000486530 GGPS1O95749 300 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 TBC1D8O95759 1140 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 PAFAH1B1P43034 410 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 VSNL1P62760 191 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 CYP24A1Q07973 514 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 LONRF2Q1L5Z9 754 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 GLYCTKQ8IVS8 523 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 SEPT1Q8WYJ6 367 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 CEP89Q96ST8 783 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 PCYT2Q99447 389 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 COQ4Q9Y3A0 265 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 PPME1Q9Y570 386 aa22.05■■□□□ 1.12
HPS3-206ENST00000486530 LRRN2O75325 713 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 FTCDO95954 541 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 ARL2P36404 184 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 LIG4P49917 911 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 STAT5BP51692 787 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 STRN3Q13033 797 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 KCTD2Q14681 263 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 CCDC70Q6NSX1 233 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 MMGT1Q8N4V1 131 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 TMEM143Q96AN5 459 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 CCDC127Q96BQ5 260 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 MMP19Q99542 508 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 KIAA1586Q9HCI6 787 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 NMRK2Q9NPI5 230 aa22.04■■□□□ 1.12
HPS3-206ENST00000486530 DNAJC25-GNG10A0A024R161 153 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 KIAA0391O15091 583 aaKnown RBP22.03■■□□□ 1.12
HPS3-206ENST00000486530 NOP2P46087 812 aaKnown RBP22.03■■□□□ 1.12
HPS3-206ENST00000486530 MAP2K1Q02750 393 aaPredicted RBP22.03■■□□□ 1.12
HPS3-206ENST00000486530 C2orf54Q08AI8 447 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 TARBP2Q15633 366 aaKnown RBP22.03■■□□□ 1.12
HPS3-206ENST00000486530 DEPTORQ8TB45 409 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 ASAP3Q8TDY4 903 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 FAM167AQ96KS9 214 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 FGD4Q96M96 766 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 PSMB7Q99436 277 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 MROH8Q9H579 483 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 MCM3APO60318 1980 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 CELF2O95319 508 aaKnown RBP22.03■■□□□ 1.12
HPS3-206ENST00000486530 CYP2C8P10632 490 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 CETPP11597 493 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 TNFAIP3P21580 790 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 GLRA2P23416 452 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 CXCR5P32302 372 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 TCF7P36402 384 aaPredicted RBP22.03■■□□□ 1.12
HPS3-206ENST00000486530 LMBR1Q8WVP7 490 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 NCANO14594 1321 aa22.03■■□□□ 1.12
HPS3-206ENST00000486530 LOC102724159A0A0B4J2E5 919 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 EXTL3O43909 919 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 PIGRP01833 764 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 PGK2P07205 417 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 TMEM253P0C7T8 217 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 GPC3P51654 580 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 GTF2A2P52657 109 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 GALCP54803 685 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 PWP2Q15269 919 aaKnown RBP22.02■■□□□ 1.12
HPS3-206ENST00000486530 CFAP221Q4G0U5 840 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 BEND6Q5SZJ8 279 aaPredicted RBP22.02■■□□□ 1.12
HPS3-206ENST00000486530 C2orf69Q8N8R5 385 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 LRRC57Q8N9N7 239 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 SPATA4Q8NEY3 305 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 AGPAT1Q99943 283 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 SLC45A1Q9Y2W3 748 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 STYXL1Q9Y6J8 313 aa22.02■■□□□ 1.12
HPS3-206ENST00000486530 ZNF233A6NK53 670 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 CES2O00748 559 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 ERVK-9P63128 1117 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 LY6KQ17RY6 165 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 EEPD1Q7L9B9 569 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 FBXL13Q8NEE6 735 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 SHCBP1Q8NEM2 672 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 TPCN2Q8NHX9 752 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 GTF3C2Q8WUA4 911 aaPredicted RBP22.01■■□□□ 1.11
HPS3-206ENST00000486530 FUT8Q9BYC5 575 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 AZI2Q9H6S1 392 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 RNF216Q9NWF9 866 aaPredicted RBP22.01■■□□□ 1.11
HPS3-206ENST00000486530 PNMA3Q9UL41 463 aa22.01■■□□□ 1.11
HPS3-206ENST00000486530 LRRIQ4A6NIV6 560 aa22■■□□□ 1.11
HPS3-206ENST00000486530 BTBD19C9JJ37 291 aa22■■□□□ 1.11
HPS3-206ENST00000486530 MFAP3P55082 362 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms