RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SCFD2Q8WU76 684 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 GPR20Q99678 358 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 SH2D3AQ9BRG2 576 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.97□□□□□ -0.33
PKP4-213ENST00000486254 PCIF1Q9H4Z3 704 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 MLXIPQ9HAP2 919 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 TFR2Q9UP52 801 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 DIS3Q9Y2L1 958 aaKnown RBP12.97□□□□□ -0.33
PKP4-213ENST00000486254 PLXNB2O15031 1838 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 MCM3APO60318 1980 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 RBM47A0AV96 593 aaKnown RBP12.96□□□□□ -0.33
PKP4-213ENST00000486254 DDX3XO00571 662 aaKnown RBP eCLIP12.96□□□□□ -0.33
PKP4-213ENST00000486254 ZRANB2O95218 330 aaKnown RBP eCLIP12.96□□□□□ -0.33
PKP4-213ENST00000486254 MOCS3O95396 460 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 H2AFZP0C0S5 128 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 ZBTB48P10074 688 aaPredicted RBP12.96□□□□□ -0.33
PKP4-213ENST00000486254 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.33
PKP4-213ENST00000486254 KLRC1P26715 233 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 HADHBP55084 474 aaKnown RBP12.96□□□□□ -0.33
PKP4-213ENST00000486254 DLG4P78352 724 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 MXD4Q14582 209 aaPredicted RBP12.96□□□□□ -0.33
PKP4-213ENST00000486254 TTLL4Q14679 1199 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 PSMD6Q15008 389 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 IER5Q5VY09 327 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 WDR93Q6P2C0 686 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 C15orf39Q6ZRI6 1047 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 H2AFVQ71UI9 128 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 CBWD2Q8IUF1 395 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 DEPTORQ8TB45 409 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 PSPC1Q8WXF1 523 aaKnown RBP12.96□□□□□ -0.33
PKP4-213ENST00000486254 POMGNT1Q8WZA1 660 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 SHC3Q92529 594 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.33
PKP4-213ENST00000486254 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 TLR10Q9BXR5 811 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 VTA1Q9NP79 307 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 FAM53CQ9NYF3 392 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 SALL4Q9UJQ4 1053 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 TELO2Q9Y4R8 837 aa12.96□□□□□ -0.33
PKP4-213ENST00000486254 GRID2IPA4D2P6 1211 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 ZNF233A6NK53 670 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 LRRIQ3A6PVS8 624 aaPredicted RBP12.95□□□□□ -0.34
PKP4-213ENST00000486254 ENC1O14682 589 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 ADCY3O60266 1144 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 TMEM253P0C7T8 217 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 GCLMP48507 274 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 LIG4P49917 911 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 SP4Q02446 784 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 GCNT1Q02742 428 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 ARID5AQ03989 594 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 GRM1Q13255 1194 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 Q3C1V9 767 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 EAPPQ56P03 285 aaPredicted RBP12.95□□□□□ -0.34
PKP4-213ENST00000486254 TMCO3Q6UWJ1 677 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 CREG2Q8IUH2 290 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 FAM71AQ8IYT1 594 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 FBXL13Q8NEE6 735 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 ASAP3Q8TDY4 903 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 DHX38Q92620 1227 aaKnown RBP12.95□□□□□ -0.34
PKP4-213ENST00000486254 OSBPL9Q96SU4 736 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 KIFC3Q9BVG8 833 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 ANKZF1Q9H8Y5 726 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 ZSWIM8A7E2V4 1837 aa12.95□□□□□ -0.34
PKP4-213ENST00000486254 GZMAP12544 262 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 AP3M2P53677 418 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 MFAP3P55082 362 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 POU5F1BQ06416 359 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 ZNF792Q3KQV3 632 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 MEI1Q5TIA1 1274 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 GJB7Q6PEY0 223 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 SLFN11Q7Z7L1 901 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 SYCE1Q8N0S2 351 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 MMGT1Q8N4V1 131 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 LRRC57Q8N9N7 239 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 RDH13Q8NBN7 331 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 RFFLQ8WZ73 363 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 BICD1Q96G01 975 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 PARD6BQ9BYG5 372 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 NFKBIZQ9BYH8 718 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 C2orf40Q9H1Z8 148 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 SMARCAD1Q9H4L7 1026 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 OGFRQ9NZT2 677 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 HDAC6Q9UBN7 1215 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 PUF60Q9UHX1 559 aaKnown RBP12.94□□□□□ -0.34
PKP4-213ENST00000486254 ADGRA2Q96PE1 1338 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 A0A0B4J269 797 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 K7ERI5 159 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 NOP56O00567 594 aaKnown RBP12.94□□□□□ -0.34
PKP4-213ENST00000486254 HBP1O60381 514 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 ERLIN1O75477 346 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 ARIH2O95376 493 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 GPR162Q16538 588 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 MAMDC4Q6UXC1 1216 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
PKP4-213ENST00000486254 NT5C1BQ96P26 610 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 CCDC113Q9H0I3 377 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 ARFGAP3Q9NP61 516 aa12.94□□□□□ -0.34
PKP4-213ENST00000486254 AGO2Q9UKV8 859 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms