RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 PCDHA12Q9UN75 941 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 POTEMA6NI47 508 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 LAD1O00515 517 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 BMP15O95972 392 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 CTSAP10619 480 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 PRPHP41219 470 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 TBC1D8BQ0IIM8 1120 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 PPP2R5CQ13362 524 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 NCAPH2Q6IBW4 605 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 MIER3Q7Z3K6 550 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 FLCNQ8NFG4 579 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 ATP6V1DQ9Y5K8 247 aa19.58■□□□□ 0.72
MCF2L-226ENST00000486210 MYH15Q9Y2K3 1946 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 ZC3H11AO75152 810 aaKnown RBP eCLIP19.57■□□□□ 0.72
MCF2L-226ENST00000486210 YEATS4O95619 227 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 NCLP19338 710 aaKnown RBP19.57■□□□□ 0.72
MCF2L-226ENST00000486210 FXR2P51116 673 aaKnown RBP eCLIP19.57■□□□□ 0.72
MCF2L-226ENST00000486210 DRP2Q13474 957 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 STK38Q15208 465 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 UGCGQ16739 394 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 ATL3Q6DD88 541 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 TMC5Q6UXY8 1006 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 DTHD1Q6ZMT9 781 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 DDX53Q86TM3 631 aaKnown RBP19.57■□□□□ 0.72
MCF2L-226ENST00000486210 ADSSL1Q8N142 457 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 IGSF21Q96ID5 467 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 VN1R3Q9BXE9 311 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 NRDE2Q9H7Z3 1164 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 CYP26B1Q9NR63 512 aa19.57■□□□□ 0.72
MCF2L-226ENST00000486210 FBXO2Q9UK22 296 aaPredicted RBP19.57■□□□□ 0.72
MCF2L-226ENST00000486210 VWA3AA6NCI4 1184 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 MEIS3P2A8K0S8 358 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 AOC1P19801 751 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 KRT85P78386 507 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 CDC42EP1Q00587 391 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 ARL6IP4Q66PJ3 421 aaKnown RBP19.56■□□□□ 0.72
MCF2L-226ENST00000486210 NLRP7Q8WX94 980 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 LPPQ93052 612 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 CLIC6Q96NY7 704 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 GDPD2Q9HCC8 539 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 DACT1Q9NYF0 836 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 SEPT9Q9UHD8 586 aaPredicted RBP19.56■□□□□ 0.72
MCF2L-226ENST00000486210 RCOR1Q9UKL0 485 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 CFAP45Q9UL16 551 aa19.56■□□□□ 0.72
MCF2L-226ENST00000486210 PP2D1A8MPX8 630 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 SPTLC2O15270 562 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 B4GALT3O60512 393 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 GALTP07902 379 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 PHKA2P46019 1235 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 ID4P47928 161 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 DNM2P50570 870 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 POLGP54098 1239 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-226ENST00000486210 BMS1Q14692 1282 aaKnown RBP19.55■□□□□ 0.72
MCF2L-226ENST00000486210 LONRF3Q496Y0 759 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 XKR3Q5GH77 459 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 ERMP1Q7Z2K6 904 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 GPR149Q86SP6 731 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 CCDC105Q8IYK2 499 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 LEO1Q8WVC0 666 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-226ENST00000486210 TRAIPQ9BWF2 469 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 TBC1D13Q9NVG8 400 aa19.55■□□□□ 0.72
MCF2L-226ENST00000486210 MORC2Q9Y6X9 1032 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-226ENST00000486210 CDC25AP30304 524 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 GIT2Q14161 759 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 EPHA7Q15375 998 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 TARBP2Q15633 366 aaKnown RBP19.54■□□□□ 0.72
MCF2L-226ENST00000486210 PTPN14Q15678 1187 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 MTERF2Q49AM1 385 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 CABP7Q86V35 215 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 IGSF22Q8N9C0 903 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 CEP89Q96ST8 783 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 JPH2Q9BR39 696 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-226ENST00000486210 GCOM2Q9BZD3 368 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-226ENST00000486210 CHST12Q9NRB3 414 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 DNAJB4Q9UDY4 337 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 DUSP12Q9UNI6 340 aa19.54■□□□□ 0.72
MCF2L-226ENST00000486210 SRPRBQ9Y5M8 271 aaKnown RBP19.54■□□□□ 0.72
MCF2L-226ENST00000486210 PPP6R2O75170 966 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 SLC11A1P49279 550 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 TDGQ13569 410 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 PDIA5Q14554 519 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 ANGPT1Q15389 498 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 SPECC1Q5M775 1068 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 DYDC2Q96IM9 177 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 EIF2AK1Q9BQI3 630 aaKnown RBP19.53■□□□□ 0.72
MCF2L-226ENST00000486210 CSRNP2Q9H175 543 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 SFXN1Q9H9B4 322 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 KCNK12Q9HB15 430 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 RGL1Q9NZL6 768 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 LRWD1Q9UFC0 647 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 GVINP1Q7Z2Y8 2422 aa19.53■□□□□ 0.72
MCF2L-226ENST00000486210 DNAH14Q0VDD8 3507 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 A0A087WZ62 844 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 DKC1O60832 514 aaKnown RBP eCLIP19.52■□□□□ 0.721e-7■■■■■ 45.3
MCF2L-226ENST00000486210 OFD1O75665 1012 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 CLCN4P51793 760 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 CCDC149Q6ZUS6 474 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 ZNF280BQ86YH2 543 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 KRI1Q8N9T8 703 aaKnown RBP19.52■□□□□ 0.72
MCF2L-226ENST00000486210 DTWD2Q8NBA8 298 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms