RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ZFP42Q96MM3 310 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 MMTAG2Q9BU76 263 aaKnown RBP19.51■□□□□ 0.71
COL6A1-204ENST00000486023 APOL5Q9BWW9 433 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 C2orf40Q9H1Z8 148 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 NXF3Q9H4D5 531 aaKnown RBP19.51■□□□□ 0.71
COL6A1-204ENST00000486023 NGRNQ9NPE2 291 aaKnown RBP19.51■□□□□ 0.71
COL6A1-204ENST00000486023 UBN1Q9NPG3 1134 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 KANSL3Q9P2N6 904 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 CD207Q9UJ71 328 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 FAM50BQ9Y247 325 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 FAN1Q9Y2M0 1017 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 PRG3Q9Y2Y8 225 aaPredicted RBP19.51■□□□□ 0.71
COL6A1-204ENST00000486023 KIAA1671Q9BY89 1806 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 CNTNAP2Q9UHC6 1331 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 BRWD1Q9NSI6 2320 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 ARL5CA6NH57 179 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 TTLL13PA6NNM8 815 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 FSCN2O14926 492 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 B4GALT3O60512 393 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 PRKCBP05771 671 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 PDCP20941 246 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 OR1G1P47890 313 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 SCNN1GP51170 649 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 COL19A1Q14993 1142 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 PPP2R5AQ15172 486 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 PDE12Q6L8Q7 609 aaKnown RBP19.5■□□□□ 0.71
COL6A1-204ENST00000486023 KCNK18Q7Z418 384 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 KIFAP3Q92845 792 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 IGSF21Q96ID5 467 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 BDP1A6H8Y1 2624 aa19.5■□□□□ 0.71
COL6A1-204ENST00000486023 ARID2Q68CP9 1835 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 A0A1B0GUA9 196 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 SFI1A8K8P3 1242 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 HIP1RO75146 1068 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 NAMPTP43490 491 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 PEX3P56589 373 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 DHX8Q14562 1220 aaKnown RBP19.49■□□□□ 0.71
COL6A1-204ENST00000486023 SMC1AQ14683 1233 aaKnown RBP19.49■□□□□ 0.71
COL6A1-204ENST00000486023 BMS1Q14692 1282 aaKnown RBP19.49■□□□□ 0.71
COL6A1-204ENST00000486023 SF3A1Q15459 793 aaKnown RBP19.49■□□□□ 0.71
COL6A1-204ENST00000486023 DUSP6Q16828 381 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 CDCA2Q69YH5 1023 aaPredicted RBP19.49■□□□□ 0.71
COL6A1-204ENST00000486023 BRAPQ7Z569 592 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 CABP7Q86V35 215 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 RASSF8Q8NHQ8 419 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 BCL7CQ8WUZ0 217 aaPredicted RBP19.49■□□□□ 0.71
COL6A1-204ENST00000486023 PNMA5Q96PV4 448 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 RUSC1Q9BVN2 902 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 FZD8Q9H461 694 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 CD320Q9NPF0 282 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 MIOSQ9NXC5 875 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 CLEC1BQ9P126 229 aa19.49■□□□□ 0.71
COL6A1-204ENST00000486023 K7ELQ4 463 aaPredicted RBP19.48■□□□□ 0.71
COL6A1-204ENST00000486023 NRP1O14786 923 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 MBTPS2O43462 519 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 GLP2RO95838 553 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 SYT1P21579 422 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 UBA7P41226 1012 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 CEBPZQ03701 1054 aaKnown RBP19.48■□□□□ 0.71
COL6A1-204ENST00000486023 RINT1Q6NUQ1 792 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 FAM173BQ6P4H8 233 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 FAM178BQ8IXR5 827 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 GJD3Q8N144 294 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 MRPL43Q8N983 215 aaKnown RBP19.48■□□□□ 0.71
COL6A1-204ENST00000486023 VN1R2Q8NFZ6 395 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 RSPH1Q8WYR4 309 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 PLXNA4Q9HCM2 1894 aa19.48■□□□□ 0.71
COL6A1-204ENST00000486023 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.47■□□□□ 0.71
COL6A1-204ENST00000486023 K7ERI5 159 aa19.47■□□□□ 0.71
COL6A1-204ENST00000486023 N4BP3O15049 544 aa19.47■□□□□ 0.71
COL6A1-204ENST00000486023 ARL6IP4Q66PJ3 421 aaKnown RBP19.47■□□□□ 0.71
COL6A1-204ENST00000486023 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
COL6A1-204ENST00000486023 RABGGTAQ92696 567 aa19.47■□□□□ 0.71
COL6A1-204ENST00000486023 PRIMPOLQ96LW4 560 aa19.47■□□□□ 0.71
COL6A1-204ENST00000486023 CDCA3Q99618 268 aaPredicted RBP19.47■□□□□ 0.71
COL6A1-204ENST00000486023 ADPGKQ9BRR6 497 aa19.47■□□□□ 0.71
COL6A1-204ENST00000486023 PDZD7Q9H5P4 517 aa19.47■□□□□ 0.71
COL6A1-204ENST00000486023 SNTG2Q9NY99 539 aa19.47■□□□□ 0.71
COL6A1-204ENST00000486023 GIT1Q9Y2X7 761 aa19.47■□□□□ 0.71
COL6A1-204ENST00000486023 MUC3AQ02505 3323 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 NPHP3-ACAD11A0A0J9YXS1 232 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 C2orf71A6NGG8 1288 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 ACKR2O00590 384 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 NR1I2O75469 434 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 EDN1P05305 212 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 PLA2G4BP0C869 781 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 NPTX2P47972 431 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 EFNA5P52803 228 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 CACNB1Q02641 598 aaPredicted RBP19.46■□□□□ 0.71
COL6A1-204ENST00000486023 GRIN1Q05586 938 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 SMAD4Q13485 552 aaKnown RBP19.46■□□□□ 0.71
COL6A1-204ENST00000486023 DDX53Q86TM3 631 aaKnown RBP19.46■□□□□ 0.71
COL6A1-204ENST00000486023 CALML4Q96GE6 196 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 DRC1Q96MC2 740 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 RPS6KC1Q96S38 1066 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 NT5C3AQ9H0P0 336 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 KMT5AQ9NQR1 393 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 GDAQ9Y2T3 454 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 CLIC4Q9Y696 253 aa19.46■□□□□ 0.71
COL6A1-204ENST00000486023 C2CD2LO14523 706 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms