RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 RNF39Q9H2S5 420 aa28.53■■■□□ 2.16
HLA-F-227ENST00000485513 NR2E1Q9Y466 385 aa28.53■■■□□ 2.16
HLA-F-227ENST00000485513 HES2Q9Y543 173 aa28.53■■■□□ 2.16
HLA-F-227ENST00000485513 INPPL1O15357 1258 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 ARF4P18085 180 aaPredicted RBP28.52■■■□□ 2.16
HLA-F-227ENST00000485513 MTHFRP42898 656 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 BMP8AQ7Z5Y6 402 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 CATSPER3Q86XQ3 398 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 SLC22A17Q8WUG5 538 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 RIPOR3Q96MK2 946 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 GAD1Q99259 594 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 TRIM6Q9C030 488 aaPredicted RBP28.52■■■□□ 2.16
HLA-F-227ENST00000485513 KCNH6Q9H252 994 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 FOXP1Q9H334 677 aaPredicted RBP28.52■■■□□ 2.16
HLA-F-227ENST00000485513 POMKQ9H5K3 350 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 TSHZ2Q9NRE2 1034 aa28.52■■■□□ 2.16
HLA-F-227ENST00000485513 ARL5CA6NH57 179 aa28.51■■■□□ 2.15
HLA-F-227ENST00000485513 MED24O75448 989 aa28.51■■■□□ 2.15
HLA-F-227ENST00000485513 SSBP05455 408 aaKnown RBP eCLIP28.51■■■□□ 2.15
HLA-F-227ENST00000485513 HOXD11P31277 338 aaPredicted RBP28.51■■■□□ 2.15
HLA-F-227ENST00000485513 MLH1P40692 756 aa28.51■■■□□ 2.15
HLA-F-227ENST00000485513 ORC2Q13416 577 aaPredicted RBP28.51■■■□□ 2.15
HLA-F-227ENST00000485513 ZNF174Q15697 407 aa28.51■■■□□ 2.15
HLA-F-227ENST00000485513 MAEAQ7L5Y9 396 aa28.51■■■□□ 2.15
HLA-F-227ENST00000485513 PPFIBP1Q86W92 1011 aa28.51■■■□□ 2.15
HLA-F-227ENST00000485513 HACE1Q8IYU2 909 aa28.51■■■□□ 2.15
HLA-F-227ENST00000485513 C12orf76Q8N812 135 aaPredicted RBP28.51■■■□□ 2.15
HLA-F-227ENST00000485513 ZSCAN31Q96LW9 406 aaPredicted RBP28.51■■■□□ 2.15
HLA-F-227ENST00000485513 POLR3CQ9BUI4 534 aaPredicted RBP28.51■■■□□ 2.15
HLA-F-227ENST00000485513 APOL6Q9BWW8 343 aa28.51■■■□□ 2.15
HLA-F-227ENST00000485513 EMILIN2Q9BXX0 1053 aa28.51■■■□□ 2.15
HLA-F-227ENST00000485513 DBR1Q9UK59 544 aaKnown RBP28.51■■■□□ 2.15
HLA-F-227ENST00000485513 B4GALT5O43286 388 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 OR52Z1P0C646 297 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 OR1G1P47890 313 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 HMGN5P82970 282 aaKnown RBP28.5■■■□□ 2.15
HLA-F-227ENST00000485513 PTPN21Q16825 1174 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 COLGALT2Q8IYK4 626 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 MCPH1Q8NEM0 835 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 FBXO18Q8NFZ0 1043 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 ERMNQ8TAM6 284 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 PBXIP1Q96AQ6 731 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 NACC1Q96RE7 527 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 GPRC5CQ9NQ84 441 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 GIT1Q9Y2X7 761 aa28.5■■■□□ 2.15
HLA-F-227ENST00000485513 PRG3Q9Y2Y8 225 aaPredicted RBP28.5■■■□□ 2.15
HLA-F-227ENST00000485513 TDRD15B5MCY1 1934 aaKnown RBP28.49■■■□□ 2.15
HLA-F-227ENST00000485513 LRRIQ4A6NIV6 560 aa28.49■■■□□ 2.15
HLA-F-227ENST00000485513 WEE2P0C1S8 567 aa28.49■■■□□ 2.15
HLA-F-227ENST00000485513 SCNN1GP51170 649 aa28.49■■■□□ 2.15
HLA-F-227ENST00000485513 SIGLEC14Q08ET2 396 aa28.49■■■□□ 2.15
HLA-F-227ENST00000485513 CABP7Q86V35 215 aa28.49■■■□□ 2.15
HLA-F-227ENST00000485513 ZFP42Q96MM3 310 aa28.49■■■□□ 2.15
HLA-F-227ENST00000485513 KLHL5Q96PQ7 755 aa28.49■■■□□ 2.15
HLA-F-227ENST00000485513 NXF3Q9H4D5 531 aaKnown RBP28.49■■■□□ 2.15
HLA-F-227ENST00000485513 SH2B1Q9NRF2 756 aaPredicted RBP28.49■■■□□ 2.15
HLA-F-227ENST00000485513 MRPL17Q9NRX2 175 aaKnown RBP28.49■■■□□ 2.15
HLA-F-227ENST00000485513 KLRC2P26717 231 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 RBM25P49756 843 aaKnown RBP28.48■■■□□ 2.15
HLA-F-227ENST00000485513 DSC1Q08554 894 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 GNL2Q13823 731 aaKnown RBP28.48■■■□□ 2.15
HLA-F-227ENST00000485513 ATAT1Q5SQI0 421 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 KIAA1841Q6NSI8 718 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 KANK3Q6NY19 840 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 SLC27A1Q6PCB7 646 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 POTEGQ6S5H5 508 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 ZBTB33Q86T24 672 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 FAM184AQ8NB25 1140 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 FBXL18Q96ME1 805 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 MARCH5Q9NX47 278 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 MIOSQ9NXC5 875 aa28.48■■■□□ 2.15
HLA-F-227ENST00000485513 LILRB3O75022 631 aa28.47■■■□□ 2.15
HLA-F-227ENST00000485513 NPTXRO95502 500 aa28.47■■■□□ 2.15
HLA-F-227ENST00000485513 SOD2P04179 222 aa28.47■■■□□ 2.15
HLA-F-227ENST00000485513 CNPP09543 421 aaKnown RBP28.47■■■□□ 2.15
HLA-F-227ENST00000485513 RPA1P27694 616 aa28.47■■■□□ 2.15
HLA-F-227ENST00000485513 TTC38Q5R3I4 469 aa28.47■■■□□ 2.15
HLA-F-227ENST00000485513 CDR2LQ86X02 465 aaPredicted RBP28.47■■■□□ 2.15
HLA-F-227ENST00000485513 NOSTRINQ8IVI9 506 aa28.47■■■□□ 2.15
HLA-F-227ENST00000485513 A0A1B0GUA9 196 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 C2CD4DB7Z1M9 353 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 NR1I2O75469 434 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 URODP06132 367 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 CLCN4P51793 760 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 PPP4R3CPQ6ZMV5 832 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 ZBTB8OSQ8IWT0 167 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 KIF2CQ99661 725 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 HERC2P3Q9BVR0 1158 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 SFXN1Q9H9B4 322 aa28.46■■■□□ 2.15
HLA-F-227ENST00000485513 PRMT7Q9NVM4 692 aaPredicted RBP28.46■■■□□ 2.15
HLA-F-227ENST00000485513 ARHGEF35A5YM69 484 aa28.45■■■□□ 2.14
HLA-F-227ENST00000485513 SPDYE4A6NLX3 237 aa28.45■■■□□ 2.14
HLA-F-227ENST00000485513 C2CD2LO14523 706 aa28.45■■■□□ 2.14
HLA-F-227ENST00000485513 AKAP5P24588 427 aa28.45■■■□□ 2.14
HLA-F-227ENST00000485513 CDCA2Q69YH5 1023 aaPredicted RBP28.45■■■□□ 2.14
HLA-F-227ENST00000485513 TMC5Q6UXY8 1006 aa28.45■■■□□ 2.14
HLA-F-227ENST00000485513 SUGP1Q8IWZ8 645 aaKnown RBP28.45■■■□□ 2.14
HLA-F-227ENST00000485513 PRIMPOLQ96LW4 560 aa28.45■■■□□ 2.14
HLA-F-227ENST00000485513 NOL7Q9UMY1 257 aaKnown RBP28.45■■■□□ 2.14
HLA-F-227ENST00000485513 SSX2IPQ9Y2D8 614 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms