RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 VCAM1P19320 739 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 SERPINB3P29508 390 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 PDE1AP54750 535 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 SESN3P58005 492 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 ADCY1Q08828 1119 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 DPY19L1Q2PZI1 675 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 EXOSC6Q5RKV6 272 aaKnown RBP6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 GPR158Q5T848 1215 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 CDC42EP5Q6NZY7 148 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 C1orf228Q6PIY5 440 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 UBE3DQ7Z6J8 389 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 ALYREFQ86V81 257 aaKnown RBP6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 SMAP1Q8IYB5 467 aaPredicted RBP6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 C2orf69Q8N8R5 385 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 CLRN3Q8NCR9 226 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 SYTL5Q8TDW5 730 aaPredicted RBP6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 PARD3BQ8TEW8 1205 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 CDCA5Q96FF9 252 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 TNIP3Q96KP6 325 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 KREMEN1Q96MU8 473 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 SENP7Q9BQF6 1050 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 FOXQ1Q9C009 403 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 BOLA2Q9H3K6 86 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 TDRD3Q9H7E2 651 aaKnown RBP6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 AP4E1Q9UPM8 1137 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 SF3B6Q9Y3B4 125 aaKnown RBP6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 MYH7P12883 1935 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 AK9Q5TCS8 1911 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 ASTN2O75129 1339 aaPredicted RBP6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 SYNGAP1Q96PV0 1343 aa6.48□□□□□ -1.37
NHLRC3-205ENST00000485407 LAMA2P24043 3122 aaKnown RBP6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 MAST2Q6P0Q8 1798 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 CLRN2A0PK11 232 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 GOLIM4O00461 696 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 FKTNO75072 461 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 ASGR2P07307 311 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 MYL3P08590 195 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 ATP2A2P16615 1042 aaKnown RBP6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 ITIH2P19823 946 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 CAP2P40123 477 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 BTDP43251 543 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 GPR85P60893 370 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 ODF1Q14990 250 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 UBE3CQ15386 1083 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 CLUL1Q15846 466 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 SLC9C2Q5TAH2 1124 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 DENND5AQ6IQ26 1287 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 PPIL6Q8IXY8 311 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 AMOTL1Q8IY63 956 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 CMTR2Q8IYT2 770 aaKnown RBP6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 CPXCR1Q8N123 301 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 KBTBD3Q8NAB2 608 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 GALNT11Q8NCW6 608 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 ZNF384Q8TF68 577 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 PPP1R13LQ8WUF5 828 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 FAM151AQ8WW52 585 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 TEPSINQ96N21 525 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 AIFM3Q96NN9 605 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 DSCC1Q9BVC3 393 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 PHF20Q9BVI0 1012 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 DHX36Q9H2U1 1008 aaKnown RBP6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 PIDD1Q9HB75 910 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 VEZTQ9HBM0 779 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 GBA2Q9HCG7 927 aaPredicted RBP6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 PLCB1Q9NQ66 1216 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 PIH1D3Q9NQM4 214 aaKnown RBP6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 USP40Q9NVE5 1235 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 MTMR10Q9NXD2 777 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 B4GALT6Q9UBX8 382 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 FBXO9Q9UK97 447 aaPredicted RBP6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 CEP131Q9UPN4 1083 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 PCDHAC2Q9Y5I4 1007 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 EYSQ5T1H1 3165 aa6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 COL2A1P02458 1487 aaPredicted RBP6.47□□□□□ -1.37
NHLRC3-205ENST00000485407 ATRNL1Q5VV63 1379 aa6.46□□□□□ -1.37
NHLRC3-205ENST00000485407 ADM5C9JUS6 153 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 GNB5O14775 395 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 PMM2O15305 246 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 LILRB5O75023 590 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 ADAM11O75078 769 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 RBP3P10745 1247 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 PDE6AP16499 860 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 CYP7A1P22680 504 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 CD68P34810 354 aaPredicted RBP6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 ADD2P35612 726 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 IREB2P48200 963 aaKnown RBP6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 SCRN1Q12765 414 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 ACAP2Q15057 778 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 TMEM177Q53S58 311 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 IFIT1BQ5T764 474 aaKnown RBP6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 CHSY3Q70JA7 882 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 CENPQQ7L2Z9 268 aaPredicted RBP6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 ARMC9Q7Z3E5 817 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 SLC5A5Q92911 643 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 ISL2Q96A47 359 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 NUP88Q99567 741 aaPredicted RBP6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 MDFIQ99750 246 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 ZFYVE21Q9BQ24 234 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 GFOD1Q9NXC2 390 aa6.46□□□□□ -1.38
NHLRC3-205ENST00000485407 PHTF1Q9UMS5 762 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms