RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SRGAP2CP0DJJ0 459 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 KIAA0319Q5VV43 1072 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 ELMSAN1Q6PJG2 1045 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 OTUD6AQ7L8S5 288 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 FERMT3Q86UX7 667 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 CCDC105Q8IYK2 499 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 COLGALT2Q8IYK4 626 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
HDAC6-227ENST00000485102 SMG8Q8ND04 991 aaKnown RBP14.54□□□□□ -0.08
HDAC6-227ENST00000485102 NKD2Q969F2 451 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-227ENST00000485102 NAP1L4Q99733 375 aaKnown RBP14.54□□□□□ -0.08
HDAC6-227ENST00000485102 HERC2P3Q9BVR0 1158 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 WDR6Q9NNW5 1121 aaKnown RBP14.54□□□□□ -0.08
HDAC6-227ENST00000485102 MARCH5Q9NX47 278 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 WRAP73Q9P2S5 460 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-227ENST00000485102 WNT16Q9UBV4 365 aa14.54□□□□□ -0.08
HDAC6-227ENST00000485102 MTCL1Q9Y4B5 1905 aaKnown RBP14.54□□□□□ -0.08
HDAC6-227ENST00000485102 DCHS1Q96JQ0 3298 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 URODP06132 367 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 ADH1AP07327 375 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 YWHABP31946 246 aaKnown RBP14.53□□□□□ -0.08
HDAC6-227ENST00000485102 PTENP60484 403 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 DSG1Q02413 1049 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 MXD4Q14582 209 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-227ENST00000485102 NEK8Q86SG6 692 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 STAMQ92783 540 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 HAS1Q92839 578 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 TMEM143Q96AN5 459 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 PHF20Q9BVI0 1012 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 PLEKHA4Q9H4M7 779 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 ZSWIM4Q9H7M6 989 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 CHST7Q9NS84 486 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 EPS15L1Q9UBC2 864 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 CYP46A1Q9Y6A2 500 aa14.53□□□□□ -0.08
HDAC6-227ENST00000485102 CCDC195A0A1B0GUA6 201 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 CCDC194A0A1B0GVG4 234 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 TEX28O15482 410 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 PI15O43692 258 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 N4BP1O75113 896 aaKnown RBP14.52□□□□□ -0.09
HDAC6-227ENST00000485102 POMCP01189 267 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 ITGA4P13612 1032 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 SPIRE1Q08AE8 756 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 RNF149Q8NC42 400 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 FLCNQ8NFG4 579 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 AIFM3Q96NN9 605 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 LXNQ9BS40 222 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 NFKBIZQ9BYH8 718 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 SEMA4AQ9H3S1 761 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 MAN1C1Q9NR34 630 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 GIT1Q9Y2X7 761 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 IPPQ9Y573 584 aa14.52□□□□□ -0.09
HDAC6-227ENST00000485102 CACNA1AO00555 2505 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 ZMYM2Q9UBW7 1377 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 ARL5CA6NH57 179 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 ERLIN2O94905 339 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 LYPLA2O95372 231 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 GLUD1P00367 558 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 SSBP05455 408 aaKnown RBP eCLIP14.51□□□□□ -0.09
HDAC6-227ENST00000485102 GLUD2P49448 558 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 AK2P54819 239 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 NCBP1Q09161 790 aaKnown RBP14.51□□□□□ -0.09
HDAC6-227ENST00000485102 EMC2Q15006 297 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 NOTUMQ6P988 496 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 TAS1R1Q7RTX1 841 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 FRMD5Q7Z6J6 570 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 SLFN12Q8IYM2 578 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 DTWD2Q8NBA8 298 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 GAD1Q99259 594 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 CSRNP2Q9H175 543 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 SLKQ9H2G2 1235 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-227ENST00000485102 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.51□□□□□ -0.09
HDAC6-227ENST00000485102 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.51□□□□□ -0.09
HDAC6-227ENST00000485102 FNIP2Q9P278 1114 aa14.51□□□□□ -0.09
HDAC6-227ENST00000485102 CLUHO75153 1309 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 STK36Q9NRP7 1315 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 TSPAN1O60635 241 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 NR1I2O75469 434 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 CDKL5O76039 1030 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 SLITRK3O94933 977 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 XBP1P17861 261 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 ANGPT1Q15389 498 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 AMHR2Q16671 573 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 XKR9Q5GH70 373 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 LILRA6Q6PI73 481 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 ERMP1Q7Z2K6 904 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 SIX5Q8N196 739 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 SLC44A3Q8N4M1 653 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 GSTCDQ8NEC7 633 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 ZNF707Q96C28 371 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-227ENST00000485102 MTRQ99707 1265 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 HSD17B14Q9BPX1 270 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 COLEC11Q9BWP8 271 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 EIF2AQ9BY44 585 aaKnown RBP14.5□□□□□ -0.09
HDAC6-227ENST00000485102 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 XPNPEP1Q9NQW7 623 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 MIOSQ9NXC5 875 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 ZDHHC7Q9NXF8 308 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 RGL1Q9NZL6 768 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 FBXL21Q9UKT6 434 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms