RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 GLB1LQ6UWU2 654 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 AGMOQ6ZNB7 445 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 HACE1Q8IYU2 909 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 LRRC43Q8N309 656 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 FBXO22Q8NEZ5 403 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 DDX12PQ92771 950 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 P2RX5Q93086 422 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 FIZ1Q96SL8 496 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 EIF2AQ9BY44 585 aaKnown RBP19.57■□□□□ 0.72
SREBF1-213ENST00000485080 MRPL9Q9BYD2 267 aaKnown RBP19.57■□□□□ 0.72
SREBF1-213ENST00000485080 PANK2Q9BZ23 570 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 LRRC27Q9C0I9 530 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 ST6GALNAC4Q9H4F1 302 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 PDZD7Q9H5P4 517 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 CERS4Q9HA82 394 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 SEL1LQ9UBV2 794 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 TNFSF13BQ9Y275 285 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 IPPQ9Y573 584 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 FRMD3A2A2Y4 597 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 CARNS1A5YM72 827 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 H3BNC9 293 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 SLC16A4O15374 487 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 TBCAO75347 108 aaKnown RBP19.56■□□□□ 0.72
SREBF1-213ENST00000485080 OFD1O75665 1012 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 CSPP1Q1MSJ5 1256 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 PAN2Q504Q3 1202 aaKnown RBP19.56■□□□□ 0.72
SREBF1-213ENST00000485080 LRRC55Q6ZSA7 311 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 PDILTQ8N807 584 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 RNF169Q8NCN4 708 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 CHAMP1Q96JM3 812 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 ACO2Q99798 780 aaKnown RBP19.56■□□□□ 0.72
SREBF1-213ENST00000485080 MRPL4Q9BYD3 311 aaKnown RBP19.56■□□□□ 0.72
SREBF1-213ENST00000485080 CWH43Q9H720 699 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 PTPRHQ9HD43 1115 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 TYW1Q9NV66 732 aaKnown RBP19.56■□□□□ 0.72
SREBF1-213ENST00000485080 NLRC5Q86WI3 1866 aa19.56■□□□□ 0.72
SREBF1-213ENST00000485080 SPTBN5Q9NRC6 3674 aaKnown RBP19.55■□□□□ 0.72
SREBF1-213ENST00000485080 A0A1W2PQ27 194 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 A0A1W2PQ64 194 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 A0A1W2PQD8 194 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 MEIS3P2A8K0S8 358 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 POLR2DO15514 142 aaKnown RBP19.55■□□□□ 0.72
SREBF1-213ENST00000485080 TRAK2O60296 914 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 FOSL2P15408 326 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 GAP43P17677 238 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 AMPD3Q01432 767 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-213ENST00000485080 DCAF4L1Q3SXM0 396 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 NOMO2Q5JPE7 1267 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 ZPBP2Q6X784 338 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 APBB1IPQ7Z5R6 666 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-213ENST00000485080 MYCT1Q8N699 235 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 HELQQ8TDG4 1101 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 LPPQ93052 612 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 ADPGKQ9BRR6 497 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 C11orf84Q9BUA3 381 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-213ENST00000485080 TRIM6Q9C030 488 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-213ENST00000485080 RSAD1Q9HA92 442 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 AAASQ9NRG9 546 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 KANSL3Q9P2N6 904 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 KCNH3Q9ULD8 1083 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 HPSEQ9Y251 543 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 GIT1Q9Y2X7 761 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 MYO7AQ13402 2215 aa19.55■□□□□ 0.72
SREBF1-213ENST00000485080 ITGA4P13612 1032 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 LAG3P18627 525 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 IBSPP21815 317 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-213ENST00000485080 PROZP22891 400 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 CTNNB1P35222 781 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 GTF2BQ00403 316 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 STRN3Q13033 797 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 ATF7IP2Q5U623 682 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 HAUS6Q7Z4H7 955 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 DHX58Q96C10 678 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 USP25Q9UHP3 1055 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 MTUS1Q9ULD2 1270 aa19.54■□□□□ 0.72
SREBF1-213ENST00000485080 RFXAPO00287 272 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 NPTXRO95502 500 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 PIGRP01833 764 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 GPM6BQ13491 265 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 EEF1DP3Q658K8 133 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 DYMQ7RTS9 669 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 FAM178BQ8IXR5 827 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 TRIM9Q9C026 710 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 LMAN2LQ9H0V9 348 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 RNF39Q9H2S5 420 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 NXF3Q9H4D5 531 aaKnown RBP19.53■□□□□ 0.72
SREBF1-213ENST00000485080 OLFML3Q9NRN5 406 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 PCDHB12Q9Y5F1 795 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 MTCH2Q9Y6C9 303 aa19.53■□□□□ 0.72
SREBF1-213ENST00000485080 ABLIM1O14639 778 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 GTPBP6O43824 516 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-213ENST00000485080 TOM1L1O75674 476 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 SLFN14P0C7P3 912 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 LIG1P18858 919 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 ZNF720Q7Z2F6 126 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 CDR2LQ86X02 465 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-213ENST00000485080 URGCPQ8TCY9 931 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 GDPD5Q8WTR4 605 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 C7orf25Q9BPX7 421 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms