RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 ZNF362Q5T0B9 420 aaPredicted RBP5.55□□□□□ -1.52
RC3H1-205ENST00000484867 TIGD7Q6NT04 549 aaPredicted RBP5.55□□□□□ -1.52
RC3H1-205ENST00000484867 TAS1R1Q7RTX1 841 aa5.55□□□□□ -1.52
RC3H1-205ENST00000484867 XYLT1Q86Y38 959 aa5.55□□□□□ -1.52
RC3H1-205ENST00000484867 PLXDC1Q8IUK5 500 aa5.55□□□□□ -1.52
RC3H1-205ENST00000484867 MSL3Q8N5Y2 521 aaKnown RBP5.55□□□□□ -1.52
RC3H1-205ENST00000484867 HIST1H2AHQ96KK5 128 aa5.55□□□□□ -1.52
RC3H1-205ENST00000484867 HIST1H2AJQ99878 128 aa5.55□□□□□ -1.52
RC3H1-205ENST00000484867 MYPNQ86TC9 1320 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 DIRC3C9JPN6 131 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 RAPGEF3O95398 923 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 ESRRBO95718 433 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 RNASE9P60153 205 aaKnown RBP5.54□□□□□ -1.52
RC3H1-205ENST00000484867 NHLH2Q02577 135 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 RBL2Q08999 1139 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 SCAPQ12770 1279 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 ZNF460Q14592 562 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 ABHD17BQ5VST6 288 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 BHLHA9Q7RTU4 235 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 C7orf31Q8N865 590 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 BOLLQ8N9W6 283 aaKnown RBP5.54□□□□□ -1.52
RC3H1-205ENST00000484867 CPEB3Q8NE35 698 aaKnown RBP5.54□□□□□ -1.52
RC3H1-205ENST00000484867 ASB10Q8WXI3 467 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 RTF1Q92541 710 aaKnown RBP5.54□□□□□ -1.52
RC3H1-205ENST00000484867 PTCH2Q9Y6C5 1203 aa5.54□□□□□ -1.52
RC3H1-205ENST00000484867 A0A1W2PR48 441 aa5.53□□□□□ -1.52
RC3H1-205ENST00000484867 ASLP04424 464 aa5.53□□□□□ -1.52
RC3H1-205ENST00000484867 PLA2G5P39877 138 aa5.53□□□□□ -1.52
RC3H1-205ENST00000484867 ELLP55199 621 aaPredicted RBP5.53□□□□□ -1.52
RC3H1-205ENST00000484867 BLOC1S1P78537 153 aa5.53□□□□□ -1.52
RC3H1-205ENST00000484867 GUCY1B3Q02153 619 aa5.53□□□□□ -1.52
RC3H1-205ENST00000484867 NHLH1Q02575 133 aa5.53□□□□□ -1.52
RC3H1-205ENST00000484867 PDCD4Q53EL6 469 aaKnown RBP5.53□□□□□ -1.52
RC3H1-205ENST00000484867 NELL1Q92832 810 aa5.53□□□□□ -1.52
RC3H1-205ENST00000484867 ZNF428Q96B54 188 aa5.53□□□□□ -1.52
RC3H1-205ENST00000484867 INTS7Q9NVH2 962 aaKnown RBP5.53□□□□□ -1.52
RC3H1-205ENST00000484867 CLCA2Q9UQC9 943 aa5.53□□□□□ -1.52
RC3H1-205ENST00000484867 MAST3O60307 1309 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 SALL3Q9BXA9 1300 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 UNC119BA6NIH7 251 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 DDX6P26196 483 aaKnown RBP eCLIP5.52□□□□□ -1.53
RC3H1-205ENST00000484867 CXCR5P32302 372 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 TP53BP2Q13625 1128 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 FNDC3BQ53EP0 1204 aaKnown RBP5.52□□□□□ -1.53
RC3H1-205ENST00000484867 C2orf27AQ580R0 203 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 FAM102AQ5T9C2 384 aaPredicted RBP5.52□□□□□ -1.53
RC3H1-205ENST00000484867 CAVIN3Q969G5 261 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 EPC1Q9H2F5 836 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 RSAD1Q9HA92 442 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 CABP5Q9NP86 173 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 OXSMQ9NWU1 459 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 USP36Q9P275 1121 aaKnown RBP5.52□□□□□ -1.53
RC3H1-205ENST00000484867 TESQ9UGI8 421 aaKnown RBP5.52□□□□□ -1.53
RC3H1-205ENST00000484867 PCDHB6Q9Y5E3 794 aa5.52□□□□□ -1.53
RC3H1-205ENST00000484867 PRR5-ARHGAP8B1AHC4 643 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 C1QL1O75973 258 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 PCDH8O95206 1070 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 APOL3O95236 402 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 SPDEFO95238 335 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 PFKMP08237 780 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 ANKS6Q68DC2 871 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 SRRM1Q8IYB3 904 aaKnown RBP5.51□□□□□ -1.53
RC3H1-205ENST00000484867 OR10H5Q8NGA6 315 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 NEU1Q99519 415 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 ORAI3Q9BRQ5 295 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 HDAC5Q9UQL6 1122 aa5.51□□□□□ -1.53
RC3H1-205ENST00000484867 RBMXL2O75526 392 aaKnown RBP5.5□□□□□ -1.53
RC3H1-205ENST00000484867 MATN4O95460 622 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 ATP2B1P20020 1258 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 LRRC32Q14392 662 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 ERCC6LQ2NKX8 1250 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 NAALADL2Q58DX5 795 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 ZBTB41Q5SVQ8 909 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 PIK3R6Q5UE93 754 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 ZZZ3Q8IYH5 903 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 LILRB2Q8N423 598 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 CDYL2Q8N8U2 506 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 SLC9A6Q92581 669 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 MKL1Q969V6 931 aa5.5□□□□□ -1.53
RC3H1-205ENST00000484867 C1RP00736 705 aa5.49□□□□□ -1.53
RC3H1-205ENST00000484867 ATP2A2P16615 1042 aaKnown RBP5.49□□□□□ -1.53
RC3H1-205ENST00000484867 RANGAP1P46060 587 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-205ENST00000484867 DUSP2Q05923 314 aa5.49□□□□□ -1.53
RC3H1-205ENST00000484867 FUBP1Q96AE4 644 aaKnown RBP5.49□□□□□ -1.53
RC3H1-205ENST00000484867 ARMC5Q96C12 935 aa5.49□□□□□ -1.53
RC3H1-205ENST00000484867 ZNF496Q96IT1 587 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-205ENST00000484867 HIRIP3Q9BW71 556 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-205ENST00000484867 TOMM22Q9NS69 142 aa5.49□□□□□ -1.53
RC3H1-205ENST00000484867 H2AFY2Q9P0M6 372 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-205ENST00000484867 ZMYM3Q14202 1370 aa5.48□□□□□ -1.53
RC3H1-205ENST00000484867 IGLV2-14P01704 120 aa5.48□□□□□ -1.53
RC3H1-205ENST00000484867 HSP90B1P14625 803 aaKnown RBP5.48□□□□□ -1.53
RC3H1-205ENST00000484867 MPP3Q13368 585 aa5.48□□□□□ -1.53
RC3H1-205ENST00000484867 UBE3CQ15386 1083 aa5.48□□□□□ -1.53
RC3H1-205ENST00000484867 EPHA10Q5JZY3 1008 aa5.48□□□□□ -1.53
RC3H1-205ENST00000484867 CDCA2Q69YH5 1023 aaPredicted RBP5.48□□□□□ -1.53
RC3H1-205ENST00000484867 MICALCLQ6ZW33 695 aa5.48□□□□□ -1.53
RC3H1-205ENST00000484867 HDGFL2Q7Z4V5 671 aaPredicted RBP5.48□□□□□ -1.53
RC3H1-205ENST00000484867 LYSMD2Q8IV50 215 aa5.48□□□□□ -1.53
RC3H1-205ENST00000484867 TANGO6Q9C0B7 1094 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms