RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 DSC1Q08554 894 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 ST3GAL1Q11201 340 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 ATAT1Q5SQI0 421 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 RARS2Q5T160 578 aaKnown RBP12.74□□□□□ -0.37
SCFD1-206ENST00000484733 COLGALT2Q8IYK4 626 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 RNF168Q8IYW5 571 aaPredicted RBP12.74□□□□□ -0.37
SCFD1-206ENST00000484733 TUFT1Q9NNX1 390 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 DBR1Q9UK59 544 aaKnown RBP12.74□□□□□ -0.37
SCFD1-206ENST00000484733 ZNF318Q5VUA4 2279 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 KMT2EQ8IZD2 1858 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 C2CD4DB7Z1M9 353 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 SOD2P04179 222 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 GLRA2P23416 452 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 SUGP1Q8IWZ8 645 aaKnown RBP12.73□□□□□ -0.37
SCFD1-206ENST00000484733 GPR65Q8IYL9 337 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 UBALD2Q8IYN6 164 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 HACE1Q8IYU2 909 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
SCFD1-206ENST00000484733 RHOBTB2Q9BYZ6 727 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 SFXN1Q9H9B4 322 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 MARCH5Q9NX47 278 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 DENND4AQ7Z401 1863 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 INO80B-WBP1J3KQ70 363 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 POMCP01189 267 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 SPATA31C1P0DKV0 1188 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 CLCN4P51793 760 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 NUBP1P53384 320 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 GPR149Q86SP6 731 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 LLPHQ9BRT6 129 aaKnown RBP12.73□□□□□ -0.37
SCFD1-206ENST00000484733 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
SCFD1-206ENST00000484733 TMEM60Q9H2L4 133 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 RXFP1Q9HBX9 757 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 MRPL17Q9NRX2 175 aaKnown RBP12.73□□□□□ -0.37
SCFD1-206ENST00000484733 SORCS3Q9UPU3 1222 aa12.73□□□□□ -0.37
SCFD1-206ENST00000484733 ARL5CA6NH57 179 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 PAPLNO95428 1278 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 ARF4P18085 180 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 MUTP22033 750 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 SAFBQ15424 915 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 FAM187BQ17R55 369 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 CYP26C1Q6V0L0 522 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 CABP7Q86V35 215 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 ALYREFQ86V81 257 aaKnown RBP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 C12orf76Q8N812 135 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 KREMEN2Q8NCW0 462 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 PRSS33Q8NF86 280 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 CMASQ8NFW8 434 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 CPB2Q96IY4 423 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 CCDC43Q96MW1 224 aaKnown RBP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 MIOSQ9NXC5 875 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 LIMCH1Q9UPQ0 1083 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 A0A1B0GUA9 196 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 CNPP09543 421 aaKnown RBP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 KLRC2P26717 231 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 PTPN5P54829 565 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 SLC27A1Q6PCB7 646 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 TDRD5Q8NAT2 981 aaKnown RBP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 MCPH1Q8NEM0 835 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 PIGOQ8TEQ8 1089 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 NACC1Q96RE7 527 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 RPS6KC1Q96S38 1066 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 GAD1Q99259 594 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 COLEC11Q9BWP8 271 aa12.72□□□□□ -0.37
SCFD1-206ENST00000484733 POLR3FQ9H1D9 316 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-206ENST00000484733 TDRD15B5MCY1 1934 aaKnown RBP12.71□□□□□ -0.37
SCFD1-206ENST00000484733 NR1I2O75469 434 aa12.71□□□□□ -0.37
SCFD1-206ENST00000484733 MTMR3Q13615 1198 aa12.71□□□□□ -0.37
SCFD1-206ENST00000484733 KIAA0319Q5VV43 1072 aa12.71□□□□□ -0.37
SCFD1-206ENST00000484733 CDCA2Q69YH5 1023 aaPredicted RBP12.71□□□□□ -0.37
SCFD1-206ENST00000484733 C15orf39Q6ZRI6 1047 aa12.71□□□□□ -0.37
SCFD1-206ENST00000484733 CATSPER3Q86XQ3 398 aa12.71□□□□□ -0.37
SCFD1-206ENST00000484733 HDAC7Q8WUI4 952 aa12.71□□□□□ -0.37
SCFD1-206ENST00000484733 FZD8Q9H461 694 aa12.71□□□□□ -0.37
SCFD1-206ENST00000484733 DPP7Q9UHL4 492 aa12.71□□□□□ -0.37
SCFD1-206ENST00000484733 POTEMA6NI47 508 aa12.71□□□□□ -0.38
SCFD1-206ENST00000484733 URODP06132 367 aa12.71□□□□□ -0.38
SCFD1-206ENST00000484733 MLH1P40692 756 aa12.71□□□□□ -0.38
SCFD1-206ENST00000484733 OR1G1P47890 313 aa12.71□□□□□ -0.38
SCFD1-206ENST00000484733 MRE11P49959 708 aa12.71□□□□□ -0.38
SCFD1-206ENST00000484733 ZBTB33Q86T24 672 aa12.71□□□□□ -0.38
SCFD1-206ENST00000484733 ZSCAN31Q96LW9 406 aaPredicted RBP12.71□□□□□ -0.38
SCFD1-206ENST00000484733 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.38
SCFD1-206ENST00000484733 PRMT7Q9NVM4 692 aaPredicted RBP12.71□□□□□ -0.38
SCFD1-206ENST00000484733 USO1O60763 962 aaKnown RBP12.7□□□□□ -0.38
SCFD1-206ENST00000484733 MED24O75448 989 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 SEC24BO95487 1268 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 RPA1P27694 616 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 AVPR2P30518 371 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 MCM7P33993 719 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 GLUD2P49448 558 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 SCNN1GP51170 649 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 DSG1Q02413 1049 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 IER5LQ5T953 404 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 KANK3Q6NY19 840 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms