RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 HIP1RO75146 1068 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 TBX10O75333 385 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 NPTXRO95502 500 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 POMCP01189 267 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 EDN1P05305 212 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 GALTP07902 379 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 LIG1P18858 919 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 GRIN1Q05586 938 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 RESTQ13127 1097 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 PLPP4Q5VZY2 271 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 PTCRAQ6ISU1 281 aaPredicted RBP14.25□□□□□ -0.13
HDAC1-209ENST00000484305 PDE12Q6L8Q7 609 aaKnown RBP14.25□□□□□ -0.13
HDAC1-209ENST00000484305 FAM173BQ6P4H8 233 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 C1orf186Q6ZWK4 172 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 DAW1Q8N136 415 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 EFHBQ8N7U6 833 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 DEPTORQ8TB45 409 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 BCL7CQ8WUZ0 217 aaPredicted RBP14.25□□□□□ -0.13
HDAC1-209ENST00000484305 IFT74Q96LB3 600 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 TCF25Q9BQ70 676 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 TRIM6Q9C030 488 aaPredicted RBP14.25□□□□□ -0.13
HDAC1-209ENST00000484305 TLE6Q9H808 572 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 ENTPD7Q9NQZ7 604 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 CLIC4Q9Y696 253 aa14.25□□□□□ -0.13
HDAC1-209ENST00000484305 GRXCR2A6NFK2 248 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 HIDE1A8MVS5 230 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 BMP15O95972 392 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 PRKCBP05771 671 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 IL9P15248 144 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 AKAP5P24588 427 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 MLH1P40692 756 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 SLC11A1P49279 550 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 RBM10P98175 930 aaKnown RBP14.24□□□□□ -0.13
HDAC1-209ENST00000484305 MAPK7Q13164 816 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 PRPF4BQ13523 1007 aaKnown RBP14.24□□□□□ -0.13
HDAC1-209ENST00000484305 CLUL1Q15846 466 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 MAPK6Q16659 721 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 TMEM119Q4V9L6 283 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 CABP7Q86V35 215 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 SNX21Q969T3 373 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 TMEM169Q96HH4 297 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 IGSF21Q96ID5 467 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 CDK5RAP3Q96JB5 506 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 AK8Q96MA6 479 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 ZFP42Q96MM3 310 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 GAD1Q99259 594 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 NT5C3AQ9H0P0 336 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 PDZD7Q9H5P4 517 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 UBN1Q9NPG3 1134 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 MIOSQ9NXC5 875 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 CLEC1BQ9P126 229 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 KANSL3Q9P2N6 904 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 MTMR6Q9Y217 621 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 BDP1A6H8Y1 2624 aa14.24□□□□□ -0.13
HDAC1-209ENST00000484305 CCDC169A6NNP5 214 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 SFI1A8K8P3 1242 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 ACKR2O00590 384 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 INPPL1O15357 1258 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 GLP2RO95838 553 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 SSBP05455 408 aaKnown RBP eCLIP14.23□□□□□ -0.13
HDAC1-209ENST00000484305 NPTX2P47972 431 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 NDUFV1P49821 464 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 SCNN1GP51170 649 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 EFNA5P52803 228 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 SLC12A3P55017 1021 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 PEX3P56589 373 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 RAD51AP2Q09MP3 1159 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 PTPAQ15257 358 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 DUSP6Q16828 381 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 TMEM132AQ24JP5 1023 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 PUS10Q3MIT2 529 aaKnown RBP14.23□□□□□ -0.13
HDAC1-209ENST00000484305 TMC7Q7Z402 723 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 KCTD17Q8N5Z5 321 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 SYT2Q8N9I0 419 aaPredicted RBP14.23□□□□□ -0.13
HDAC1-209ENST00000484305 VN1R2Q8NFZ6 395 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 LRRC15Q8TF66 581 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 FAM193BQ96PV7 902 aaPredicted RBP14.23□□□□□ -0.13
HDAC1-209ENST00000484305 NGRNQ9NPE2 291 aaKnown RBP14.23□□□□□ -0.13
HDAC1-209ENST00000484305 GIT1Q9Y2X7 761 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 TRIP11Q15643 1979 aa14.23□□□□□ -0.13
HDAC1-209ENST00000484305 MYH15Q9Y2K3 1946 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 NRP1O14786 923 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 N4BP3O15049 544 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 STX6O43752 255 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 ALDH2P05091 517 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 PLA2G4BP0C869 781 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 LONP1P36776 959 aaKnown RBP14.22□□□□□ -0.13
HDAC1-209ENST00000484305 UBA7P41226 1012 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 NT5DC1Q5TFE4 455 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 EEF1DP3Q658K8 133 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 DDX53Q86TM3 631 aaKnown RBP14.22□□□□□ -0.13
HDAC1-209ENST00000484305 FAM178BQ8IXR5 827 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 COLGALT2Q8IYK4 626 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 HACE1Q8IYU2 909 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 VPS52Q8N1B4 723 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 MRPL43Q8N983 215 aaKnown RBP14.22□□□□□ -0.13
HDAC1-209ENST00000484305 GSTCDQ8NEC7 633 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 AUTS2Q8WXX7 1259 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 MSLNLQ96KJ4 702 aa14.22□□□□□ -0.13
HDAC1-209ENST00000484305 DRC1Q96MC2 740 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms