RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 FOCADQ5VW36 1801 aa12.41□□□□□ -0.42
SEC61A1-205ENST00000483956 TTI1O43156 1089 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 CEP104O60308 925 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 GRIK5Q16478 980 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 FRMD5Q7Z6J6 570 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 RNF168Q8IYW5 571 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 TPCN2Q8NHX9 752 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 ATP8B4Q8TF62 1192 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 COA7Q96BR5 231 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 PGM2Q96G03 612 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 GOLPH3Q9H4A6 298 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 SUCLA2Q9P2R7 463 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 STXBP5LQ9Y2K9 1186 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 PITPNM2Q9BZ72 1349 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 UBTFL6P0CB48 400 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 ITGA4P13612 1032 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 TM4SF1P30408 202 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 SLCO1A2P46721 670 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 TNNI2P48788 182 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 LSAMPQ13449 338 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 METTL13Q8N6R0 699 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 LINC00116Q8NCU8 138 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 NAP1L4Q99733 375 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 LBHD1Q9BQE6 289 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 MLXIPLQ9NP71 852 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 C10orf71Q711Q0 1435 aa12.4□□□□□ -0.42
SEC61A1-205ENST00000483956 O00370 1275 aa12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 PLA2G4BP0C869 781 aa12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 UCHL3P15374 230 aa12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 SKIV2L2P42285 1042 aaKnown RBP12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 NPEPPSP55786 919 aa12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 ZRSR2Q15696 482 aaKnown RBP12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 PARP6Q2NL67 630 aa12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 UBAP2Q5T6F2 1119 aaKnown RBP12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 NRAPQ86VF7 1730 aa12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 NELFCDQ8IXH7 590 aa12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 ARHGEF1Q92888 912 aaKnown RBP12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 GATA6Q92908 595 aa12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 HIC2Q96JB3 615 aa12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 TTC7AQ9ULT0 858 aaPredicted RBP12.4□□□□□ -0.43
SEC61A1-205ENST00000483956 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 MAGEA13PA6NCF6 341 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 KRIT1O00522 736 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 ZCCHC18P0CG32 403 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 SKIP12755 728 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 PLCG2P16885 1265 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 TARSP26639 723 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 BTDP43251 543 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 GJA8P48165 433 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 PLOD1Q02809 727 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 C15orf52Q6ZUT6 534 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 SYCE1Q8N0S2 351 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 SCG3Q8WXD2 468 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 FMO2Q99518 471 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 TUBGCP4Q9UGJ1 667 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 HDAC9Q9UKV0 1011 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 PCDHA12Q9UN75 941 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 TRAF3IP3Q9Y228 551 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 SLC4A7Q9Y6M7 1214 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 SPATA31A1Q5TZJ5 1347 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 CYP11B2P19099 503 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 VHLP40337 213 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 HERC4Q5GLZ8 1057 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 GPBP1Q86WP2 473 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 LRRC8CQ8TDW0 803 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 TRIM51Q9BSJ1 452 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 TXLNGYQ9BZA5 131 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 LRMDAQ9H2I8 198 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 RANBP17Q9H2T7 1088 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 DENND2DQ9H6A0 471 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 KANSL2Q9H9L4 492 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 METTL5Q9NRN9 209 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 FAM114A2Q9NRY5 505 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 TBC1D7Q9P0N9 293 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 PDP2Q9P2J9 529 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 HSFX1Q9UBD0 423 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 PRKAG3Q9UGI9 489 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 HAO1Q9UJM8 370 aa12.39□□□□□ -0.43
SEC61A1-205ENST00000483956 SUPT3HO75486 399 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 CCDC166P0CW27 439 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 NR2F2P24468 414 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 EPHB2P29323 1055 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 TCERG1LQ5VWI1 586 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 ZNF804AQ7Z570 1209 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 ECHDC2Q86YB7 292 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 NRG4Q8WWG1 115 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 HAPLN3Q96S86 360 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 TXLNGQ9NUQ3 528 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 ARMCX3Q9UH62 379 aaPredicted RBP12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 FRMPD2Q68DX3 1309 aaPredicted RBP12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 CCDC169A6NNP5 214 aa12.38□□□□□ -0.43
SEC61A1-205ENST00000483956 E9PMD0 336 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms