RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 DDX3XO00571 662 aaKnown RBP eCLIP3.84□□□□□ -1.79
PKP4-212ENST00000483881 KNG1P01042 644 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 CT47B1P0C2W7 299 aaPredicted RBP3.84□□□□□ -1.79
PKP4-212ENST00000483881 MYBL2P10244 700 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 RBP3P10745 1247 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 ETV4P43268 484 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 NEK2P51955 445 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 SMAD4Q13485 552 aaKnown RBP3.84□□□□□ -1.79
PKP4-212ENST00000483881 MTMR1Q13613 665 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 MYBPC2Q14324 1141 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 NOLC1Q14978 699 aaKnown RBP eCLIP3.84□□□□□ -1.79
PKP4-212ENST00000483881 EIF4HQ15056 248 aaKnown RBP3.84□□□□□ -1.79
PKP4-212ENST00000483881 CLUL1Q15846 466 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 CCDC96Q2M329 555 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 ODR4Q5SWX8 454 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 EFCAB2Q5VUJ9 269 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 TMEM200BQ69YZ2 307 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 MCTP2Q6DN12 878 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 ESRP1Q6NXG1 681 aaKnown RBP3.84□□□□□ -1.79
PKP4-212ENST00000483881 Q6ZUG5 572 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 RTKN2Q8IZC4 609 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 SDR16C5Q8N3Y7 309 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 Q8TCH9 128 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 FUBP3Q96I24 572 aaKnown RBP eCLIP3.84□□□□□ -1.79
PKP4-212ENST00000483881 AJUBAQ96IF1 538 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 DYDC2Q96IM9 177 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 BRIP1Q9BX63 1249 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 AMNQ9BXJ7 453 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 ANO3Q9BYT9 981 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 POFUT1Q9H488 388 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 TOPORSQ9NS56 1045 aaPredicted RBP3.84□□□□□ -1.79
PKP4-212ENST00000483881 DNAJC28Q9NX36 388 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 TRHDEQ9UKU6 1024 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 ANKRD6Q9Y2G4 727 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 SH3BP1Q9Y3L3 701 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 RPS6KL1Q9Y6S9 549 aa3.84□□□□□ -1.79
PKP4-212ENST00000483881 PRSS38A1L453 326 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 PMS2P1A4D2B8 440 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 GABRDO14764 452 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 OPHN1O60890 802 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 KATNA1O75449 491 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 MPIG6BO95866 241 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 HMGCRP04035 888 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 ZNF28P17035 718 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 AKAP5P24588 427 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 HSPA1LP34931 641 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 GPR3P46089 330 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 RGS3P49796 1198 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 MANFP55145 182 aaKnown RBP3.83□□□□□ -1.8
PKP4-212ENST00000483881 EVA1CP58658 441 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 ERVK-21P61565 698 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 IL13RA1P78552 427 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 CD83Q01151 205 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 HLTFQ14527 1009 aaKnown RBP eCLIP3.83□□□□□ -1.8
PKP4-212ENST00000483881 USP10Q14694 798 aaKnown RBP3.83□□□□□ -1.8
PKP4-212ENST00000483881 PTPN21Q16825 1174 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.83□□□□□ -1.8
PKP4-212ENST00000483881 PLEKHG6Q3KR16 790 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 LSM12Q3MHD2 195 aaKnown RBP3.83□□□□□ -1.8
PKP4-212ENST00000483881 NRN1LQ496H8 165 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 PRR31Q5SQ13 230 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 PAPD7Q5XG87 772 aaKnown RBP3.83□□□□□ -1.8
PKP4-212ENST00000483881 KANK2Q63ZY3 851 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 PPP4R3AQ6IN85 833 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 C1orf162Q8NEQ5 155 aaPredicted RBP3.83□□□□□ -1.8
PKP4-212ENST00000483881 WDR92Q96MX6 357 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 ZNF830Q96NB3 372 aaPredicted RBP3.83□□□□□ -1.8
PKP4-212ENST00000483881 NUP88Q99567 741 aaPredicted RBP3.83□□□□□ -1.8
PKP4-212ENST00000483881 PTPN18Q99952 460 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 KATNBL1Q9H079 304 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 MTG2Q9H4K7 406 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 TCF7L1Q9HCS4 588 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 AASDHPPTQ9NRN7 309 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 TERF2IPQ9NYB0 399 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 PRSS50Q9UI38 385 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 PNMA8BQ9ULN7 279 aaPredicted RBP3.83□□□□□ -1.8
PKP4-212ENST00000483881 GIT1Q9Y2X7 761 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 PDS5BQ9NTI5 1447 aa3.83□□□□□ -1.8
PKP4-212ENST00000483881 SETD1AO15047 1707 aaKnown RBP3.83□□□□□ -1.8
PKP4-212ENST00000483881 KIF21AQ7Z4S6 1674 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 PROB1E7EW31 1015 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 NRP1O14786 923 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 RFPL1O75677 317 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 PCDH8O95206 1070 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 IL18BPO95998 194 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 PFKMP08237 780 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 MC4RP32245 332 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 PTH1RQ03431 593 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 CALD1Q05682 793 aaKnown RBP3.82□□□□□ -1.8
PKP4-212ENST00000483881 TOP3AQ13472 1001 aaPredicted RBP3.82□□□□□ -1.8
PKP4-212ENST00000483881 CNGB1Q14028 1251 aaPredicted RBP3.82□□□□□ -1.8
PKP4-212ENST00000483881 MYBPC3Q14896 1274 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 TTF1Q15361 905 aaPredicted RBP3.82□□□□□ -1.8
PKP4-212ENST00000483881 INAVAQ3KP66 663 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 HSP90AB2PQ58FF8 381 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 C19orf54Q5BKX5 351 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 CT83Q5H943 113 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 MUM1L1Q5H9M0 696 aa3.82□□□□□ -1.8
PKP4-212ENST00000483881 RRP12Q5JTH9 1297 aaKnown RBP3.82□□□□□ -1.8
PKP4-212ENST00000483881 EPHA10Q5JZY3 1008 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms