RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 PSMC2P35998 433 aaKnown RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 SLC26A2P50443 739 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 NUBP1P53384 320 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ACTR2P61160 394 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ERVK-9P63128 1117 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ERVK-24P63145 666 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 SP2Q02086 613 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 CNTN2Q02246 1040 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 RAD51AP2Q09MP3 1159 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 HSP90AA2PQ14568 343 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 PPP2R5AQ15172 486 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 MEA1Q16626 185 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 CCDC40Q4G0X9 1142 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 SMYD5Q6GMV2 418 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 SWSAP1Q6NVH7 229 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 METTL7BQ6UX53 244 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ZNF662Q6ZS27 426 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ANO5Q75V66 913 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 PLPPR4Q7Z2D5 763 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ZNF467Q7Z7K2 595 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 CREBRFQ8IUR6 639 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ADHFE1Q8IWW8 467 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 CCDC170Q8IYT3 715 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 DAW1Q8N136 415 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 GLIS3Q8NEA6 775 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 AFAP1L1Q8TED9 768 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 SEPT1Q8WYJ6 367 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 USP6NLQ92738 828 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 BORCS6Q96GS4 357 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ZFP91Q96JP5 570 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 PURBQ96QR8 312 aaKnown RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ACCSQ96QU6 501 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 TTYH3Q9C0H2 523 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 GBP3Q9H0R5 595 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ZHX3Q9H4I2 956 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 NRBP2Q9NSY0 501 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ABHD10Q9NUJ1 306 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ZNHIT6Q9NWK9 470 aaKnown RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 TBC1D7Q9P0N9 293 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 ARMCX3Q9UH62 379 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 FBXL5Q9UKA1 691 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 MYO6Q9UM54 1294 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 EXOC7Q9UPT5 735 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 SIK3Q9Y2K2 1263 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 DIS3Q9Y2L1 958 aaKnown RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 LOXHD1Q8IVV2 1947 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 FLNBO75369 2602 aaKnown RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 PTPRFP10586 1907 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 FAM208BQ5VWN6 2430 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 RBM47A0AV96 593 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 SFI1A8K8P3 1242 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 RSPH10B2B2RC85 870 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 RNF225M0QZC1 329 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 DDX39AO00148 427 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 ZNF862O60290 1169 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 GCNT3O95395 438 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 NR3C1P04150 777 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 CCDC175P0C221 793 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 RSPH10BP0C881 870 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 MYBP10242 640 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 EPB41P11171 864 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 TNNT1P13805 278 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 TRIM21P19474 475 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 NMT1P30419 496 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 CASP5P51878 434 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 NCKAP1LP55160 1127 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 ETF1P62495 437 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 DMWDQ09019 674 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 KCNH2Q12809 1159 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 SYCP1Q15431 976 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 ZNF792Q3KQV3 632 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 BRDTQ58F21 947 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 XKR9Q5GH70 373 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 DNTTIP2Q5QJE6 756 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 CEP135Q66GS9 1140 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 MAMDC4Q6UXC1 1216 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 OTOP2Q7RTS6 562 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 HAUS6Q7Z4H7 955 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 RNF135Q8IUD6 432 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 FMNL3Q8IVF7 1028 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 REXO1L1PQ8IX06 675 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 NELFCDQ8IXH7 590 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 MSL3Q8N5Y2 521 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 KIF18AQ8NI77 898 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 CPLX3Q8WVH0 158 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 VTI1AQ96AJ9 217 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 PPP1R13BQ96KQ4 1090 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 CCDC43Q96MW1 224 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 TOX2Q96NM4 488 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 MMP19Q99542 508 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 FGFBP2Q9BYJ0 223 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 TXNRD2Q9NNW7 524 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 PLCB1Q9NQ66 1216 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 ZNF302Q9NR11 478 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 CYP26B1Q9NR63 512 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 PKD2L1Q9P0L9 805 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 MYO1AQ9UBC5 1043 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 GABBR1Q9UBS5 961 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 DDX41Q9UJV9 622 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms