RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PCDHGC5Q9Y5F6 944 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 PLXNA4Q9HCM2 1894 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 NT5C1B-RDH14C9J2C7 533 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 ACKR2O00590 384 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 SSBP05455 408 aaKnown RBP eCLIP15.32■□□□□ 0.04
VARS-225ENST00000482996 GALTP07902 379 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 GTF2F1P35269 517 aaKnown RBP eCLIP15.32■□□□□ 0.04
VARS-225ENST00000482996 UBA7P41226 1012 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 SF3A1Q15459 793 aaKnown RBP15.32■□□□□ 0.04
VARS-225ENST00000482996 RINT1Q6NUQ1 792 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 KCNK18Q7Z418 384 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 CABP7Q86V35 215 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 CDR2LQ86X02 465 aaPredicted RBP15.32■□□□□ 0.04
VARS-225ENST00000482996 HSCBQ8IWL3 235 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 SNX21Q969T3 373 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 CALML4Q96GE6 196 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 NECAB3Q96P71 396 aaPredicted RBP15.32■□□□□ 0.04
VARS-225ENST00000482996 ADPGKQ9BRR6 497 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 RUSC1Q9BVN2 902 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 NXF3Q9H4D5 531 aaKnown RBP15.32■□□□□ 0.04
VARS-225ENST00000482996 POLD4Q9HCU8 107 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 DAXXQ9UER7 740 aaPredicted RBP15.32■□□□□ 0.04
VARS-225ENST00000482996 HES2Q9Y543 173 aa15.32■□□□□ 0.04
VARS-225ENST00000482996 ATG2AQ2TAZ0 1938 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 GRXCR2A6NFK2 248 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 ARL5CA6NH57 179 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 HIP1RO75146 1068 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 POMCP01189 267 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 ALDH2P05091 517 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 LONP1P36776 959 aaKnown RBP15.31■□□□□ 0.04
VARS-225ENST00000482996 LTBRP36941 435 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 SLC11A1P49279 550 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 DMP1Q13316 513 aaPredicted RBP15.31■□□□□ 0.04
VARS-225ENST00000482996 SMC1AQ14683 1233 aaKnown RBP15.31■□□□□ 0.04
VARS-225ENST00000482996 C1orf186Q6ZWK4 172 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 APBB1IPQ7Z5R6 666 aaPredicted RBP15.31■□□□□ 0.04
VARS-225ENST00000482996 ZNF280BQ86YH2 543 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 RASSF8Q8NHQ8 419 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 IGSF21Q96ID5 467 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 PNMA5Q96PV4 448 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 GAD1Q99259 594 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 PLIN2Q99541 437 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 TMEM175Q9BSA9 504 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 KIFC3Q9BVG8 833 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 C17orf75Q9HAS0 396 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 DNAJB4Q9UDY4 337 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 STK39Q9UEW8 545 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 PARP2Q9UGN5 583 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 KCNG1Q9UIX4 513 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 CD207Q9UJ71 328 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 PHLPP2Q6ZVD8 1323 aa15.31■□□□□ 0.04
VARS-225ENST00000482996 K7ERI5 159 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 PER2O15055 1255 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 INPPL1O15357 1258 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 LINC01565O15544 149 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 TBX10O75333 385 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 NR1I2O75469 434 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 DDHD2O94830 711 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 PLA2G4BP0C869 781 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 SRGAP2BP0DMP2 458 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 GUCY2CP25092 1073 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 CA8P35219 290 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 MLH1P40692 756 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 NPTX2P47972 431 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 AFF1P51825 1210 aaKnown RBP15.3■□□□□ 0.04
VARS-225ENST00000482996 PEX3P56589 373 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 RESTQ13127 1097 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 DUSP6Q16828 381 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 TMEM119Q4V9L6 283 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 DDX53Q86TM3 631 aaKnown RBP15.3■□□□□ 0.04
VARS-225ENST00000482996 VPS52Q8N1B4 723 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 SYT2Q8N9I0 419 aaPredicted RBP15.3■□□□□ 0.04
VARS-225ENST00000482996 TMEM87AQ8NBN3 555 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 RPS6KC1Q96S38 1066 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 CCDC113Q9H0I3 377 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 PDZD7Q9H5P4 517 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 KCND2Q9NZV8 630 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 ZMYM2Q9UBW7 1377 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 FAN1Q9Y2M0 1017 aa15.3■□□□□ 0.04
VARS-225ENST00000482996 RBM19Q9Y4C8 960 aaKnown RBP15.3■□□□□ 0.04
VARS-225ENST00000482996 STX6O43752 255 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 CXCL14O95715 111 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 HSP90AA1P07900 732 aaKnown RBP15.29■□□□□ 0.04
VARS-225ENST00000482996 IL9P15248 144 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 AKAP5P24588 427 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 SCNN1GP51170 649 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 DLX2Q07687 328 aaPredicted RBP15.29■□□□□ 0.04
VARS-225ENST00000482996 SMAD4Q13485 552 aaKnown RBP15.29■□□□□ 0.04
VARS-225ENST00000482996 CLUL1Q15846 466 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 DCAF4L1Q3SXM0 396 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 TMEM173Q86WV6 379 aaPredicted RBP15.29■□□□□ 0.04
VARS-225ENST00000482996 DAW1Q8N136 415 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 MRPL43Q8N983 215 aaKnown RBP15.29■□□□□ 0.04
VARS-225ENST00000482996 ZFP42Q96MM3 310 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 ZSCAN16Q9H4T2 348 aaPredicted RBP15.29■□□□□ 0.04
VARS-225ENST00000482996 KMT5AQ9NQR1 393 aa15.29■□□□□ 0.04
VARS-225ENST00000482996 MTMR6Q9Y217 621 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms