RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 LARP4BQ92615 738 aaKnown RBP16.66■□□□□ 0.26
COL16A1-213ENST00000482910 SYMPKQ92797 1274 aaKnown RBP16.66■□□□□ 0.26
COL16A1-213ENST00000482910 EPSTI1Q96J88 318 aa16.66■□□□□ 0.26
COL16A1-213ENST00000482910 ALG13Q9NP73 1137 aaKnown RBP16.66■□□□□ 0.26
COL16A1-213ENST00000482910 KMT5AQ9NQR1 393 aa16.66■□□□□ 0.26
COL16A1-213ENST00000482910 TBC1D13Q9NVG8 400 aa16.66■□□□□ 0.26
COL16A1-213ENST00000482910 CCDC169A6NNP5 214 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 SPTLC2O15270 562 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 NCK2O43639 380 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 SCP2P22307 547 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 DDIT3P35638 169 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 ALDH7A1P49419 539 aaKnown RBP16.65■□□□□ 0.26
COL16A1-213ENST00000482910 SKIV2LQ15477 1246 aaKnown RBP16.65■□□□□ 0.26
COL16A1-213ENST00000482910 AAK1Q2M2I8 961 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 USP49Q70CQ1 688 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 SLC39A11Q8N1S5 342 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 MRPS27Q92552 414 aaKnown RBP16.65■□□□□ 0.26
COL16A1-213ENST00000482910 HLA-CQ95604 372 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 PPP2R3CQ969Q6 453 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 CLIC6Q96NY7 704 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 ADPGKQ9BRR6 497 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 KIFC3Q9BVG8 833 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 PDZD7Q9H5P4 517 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 NRDE2Q9H7Z3 1164 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 POLD4Q9HCU8 107 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 PRDM6Q9NQX0 595 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 SPG21Q9NZD8 308 aa16.65■□□□□ 0.26
COL16A1-213ENST00000482910 LARSQ9P2J5 1176 aaKnown RBP16.65■□□□□ 0.26
COL16A1-213ENST00000482910 PUF60Q9UHX1 559 aaKnown RBP16.65■□□□□ 0.26
COL16A1-213ENST00000482910 REV3LO60673 3130 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 H0YCG3 227 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 NPTXRO95502 500 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 DNAJB1P25685 340 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 ZNF131P52739 623 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 SMTNP53814 917 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 BCAR1P56945 870 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 MRPS5P82675 430 aaKnown RBP16.64■□□□□ 0.25
COL16A1-213ENST00000482910 KRT17Q04695 432 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 RNASELQ05823 741 aaKnown RBP16.64■□□□□ 0.25
COL16A1-213ENST00000482910 DCAF4L1Q3SXM0 396 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 LONRF3Q496Y0 759 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 TCEAL5Q5H9L2 206 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 SPECC1Q5M775 1068 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 APBB1IPQ7Z5R6 666 aaPredicted RBP16.64■□□□□ 0.25
COL16A1-213ENST00000482910 GPBP1Q86WP2 473 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 TMEM175Q9BSA9 504 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 NXF3Q9H4D5 531 aaKnown RBP16.64■□□□□ 0.25
COL16A1-213ENST00000482910 TLR9Q9NR96 1032 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 INPP5FQ9Y2H2 1132 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 UNC80Q8N2C7 3258 aa16.64■□□□□ 0.25
COL16A1-213ENST00000482910 TDRD15B5MCY1 1934 aaKnown RBP16.64■□□□□ 0.25
COL16A1-213ENST00000482910 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.63■□□□□ 0.25
COL16A1-213ENST00000482910 TTLL13PA6NNM8 815 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 EDN1P05305 212 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 PKP1Q13835 747 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 BECN1Q14457 450 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 MCM6Q14566 821 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 TMEM132AQ24JP5 1023 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 NT5DC1Q5TFE4 455 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 ATF7IP2Q5U623 682 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 RRAGBQ5VZM2 374 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 CCDC73Q6ZRK6 1079 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 KCNG4Q8TDN1 519 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 REEP2Q9BRK0 252 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 MRPL4Q9BYD3 311 aaKnown RBP16.63■□□□□ 0.25
COL16A1-213ENST00000482910 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
COL16A1-213ENST00000482910 STK39Q9UEW8 545 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 CFAP45Q9UL16 551 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 TNFSF13BQ9Y275 285 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 HES2Q9Y543 173 aa16.63■□□□□ 0.25
COL16A1-213ENST00000482910 FSD2A1L4K1 749 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 ARL5CA6NH57 179 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 SFI1A8K8P3 1242 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 FSCN2O14926 492 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 SLC16A4O15374 487 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 ZC3H11AO75152 810 aaKnown RBP eCLIP16.62■□□□□ 0.25
COL16A1-213ENST00000482910 BRD1O95696 1058 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 GALTP07902 379 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 ABCD1P33897 745 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 NCKAP1LP55160 1127 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 RAD51AP2Q09MP3 1159 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 GIT2Q14161 759 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 TJAP1Q5JTD0 557 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 FOXD4L5Q5VV16 416 aaPredicted RBP16.62■□□□□ 0.25
COL16A1-213ENST00000482910 TAS1R3Q7RTX0 852 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 CDR2LQ86X02 465 aaPredicted RBP16.62■□□□□ 0.25
COL16A1-213ENST00000482910 TMEM161BQ8NDZ6 487 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 FOXD4L4Q8WXT5 416 aaPredicted RBP16.62■□□□□ 0.25
COL16A1-213ENST00000482910 PABPC5Q96DU9 382 aaKnown RBP16.62■□□□□ 0.25
COL16A1-213ENST00000482910 ASB2Q96Q27 587 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 GAD1Q99259 594 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 ACO2Q99798 780 aaKnown RBP16.62■□□□□ 0.25
COL16A1-213ENST00000482910 UBE2ZQ9H832 354 aaPredicted RBP16.62■□□□□ 0.25
COL16A1-213ENST00000482910 PARVGQ9HBI0 331 aa16.62■□□□□ 0.25
COL16A1-213ENST00000482910 NPHP3-ACAD11A0A0J9YXS1 232 aa16.61■□□□□ 0.25
COL16A1-213ENST00000482910 CUTAO60888 179 aa16.61■□□□□ 0.25
COL16A1-213ENST00000482910 FAM13AO94988 1023 aa16.61■□□□□ 0.25
COL16A1-213ENST00000482910 MAPTP10636 758 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms