RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PDZD7Q9H5P4 517 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 IPPQ9Y573 584 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 CARNS1A5YM72 827 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 MYMKA6NI61 221 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 POLR2DO15514 142 aaKnown RBP18.24■□□□□ 0.51
HMGN1-214ENST00000482733 GTPBP6O43824 516 aaPredicted RBP18.24■□□□□ 0.51
HMGN1-214ENST00000482733 TRAK2O60296 914 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 SLC34A2O95436 690 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 NPTXRO95502 500 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 MAPTP10636 758 aaKnown RBP18.24■□□□□ 0.51
HMGN1-214ENST00000482733 GAP43P17677 238 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 CSPP1Q1MSJ5 1256 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 DCAF4L1Q3SXM0 396 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 SPOUT1Q5T280 376 aaKnown RBP18.24■□□□□ 0.51
HMGN1-214ENST00000482733 NT5DC1Q5TFE4 455 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 ATF7IP2Q5U623 682 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 DYMQ7RTS9 669 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 SPRED2Q7Z698 418 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 FAM178BQ8IXR5 827 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 SMG8Q8ND04 991 aaKnown RBP18.24■□□□□ 0.51
HMGN1-214ENST00000482733 URGCPQ8TCY9 931 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 LPPQ93052 612 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 CHAMP1Q96JM3 812 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 C11orf84Q9BUA3 381 aaPredicted RBP18.24■□□□□ 0.51
HMGN1-214ENST00000482733 RSAD1Q9HA92 442 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 TYW1Q9NV66 732 aaKnown RBP18.24■□□□□ 0.51
HMGN1-214ENST00000482733 KBTBD4Q9NVX7 518 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 KANSL3Q9P2N6 904 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 SEL1LQ9UBV2 794 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 KCNH3Q9ULD8 1083 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 TNFSF13BQ9Y275 285 aa18.24■□□□□ 0.51
HMGN1-214ENST00000482733 CHD7Q9P2D1 2997 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 ZMYM2Q9UBW7 1377 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 A0A1W2PQ27 194 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 A0A1W2PQ64 194 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 A0A1W2PQD8 194 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 EPOPA6NHQ4 379 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 H3BNC9 293 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 OFD1O75665 1012 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 LAG3P18627 525 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 POU3F3P20264 500 aaPredicted RBP18.23■□□□□ 0.51
HMGN1-214ENST00000482733 NOMO2Q5JPE7 1267 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 AGMOQ6ZNB7 445 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 TAS1R3Q7RTX0 852 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 HAUS6Q7Z4H7 955 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 P2RX5Q93086 422 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 DNAJC19Q96DA6 116 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 ACO2Q99798 780 aaKnown RBP18.23■□□□□ 0.51
HMGN1-214ENST00000482733 LMCD1Q9NZU5 365 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 GIT1Q9Y2X7 761 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 PCDHB12Q9Y5F1 795 aa18.23■□□□□ 0.51
HMGN1-214ENST00000482733 CDH23Q9H251 3354 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 TTLL13PA6NNM8 815 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 K7ENM7 598 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 RFXAPO00287 272 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 EDN1P05305 212 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 IGFBP4P22692 258 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 GPM6BQ13491 265 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 ADGRE1Q14246 886 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 LONRF3Q496Y0 759 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 ZPBP2Q6X784 338 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 CDR2LQ86X02 465 aaPredicted RBP18.22■□□□□ 0.51
HMGN1-214ENST00000482733 CEP57L1Q8IYX8 460 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 ST6GALNAC4Q9H4F1 302 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 CWH43Q9H720 699 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 USP25Q9UHP3 1055 aa18.22■□□□□ 0.51
HMGN1-214ENST00000482733 FAM237AA0A1B0GTK4 181 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 FRMD3A2A2Y4 597 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 MEIS3P2A8K0S8 358 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 INPPL1O15357 1258 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 LPXNO60711 386 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 IDEP14735 1019 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 PFKFB1P16118 471 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 PTPROQ16827 1216 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 CNNM4Q6P4Q7 775 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 LRRC55Q6ZSA7 311 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 CCDC65Q8IXS2 484 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 GDPD5Q8WTR4 605 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 TARS2Q9BW92 718 aaKnown RBP18.21■□□□□ 0.51
HMGN1-214ENST00000482733 LMAN2LQ9H0V9 348 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 NXF3Q9H4D5 531 aaKnown RBP18.21■□□□□ 0.51
HMGN1-214ENST00000482733 PTPRHQ9HD43 1115 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 CHMP5Q9NZZ3 219 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 HPSEQ9Y251 543 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 INPP5FQ9Y2H2 1132 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 USP20Q9Y2K6 914 aa18.21■□□□□ 0.51
HMGN1-214ENST00000482733 A0A1B0GVL5 298 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 TOM1L1O75674 476 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 SLFN14P0C7P3 912 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 PPM1AP35813 382 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 GTF2BQ00403 316 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 RNASELQ05823 741 aaKnown RBP18.2■□□□□ 0.5
HMGN1-214ENST00000482733 HERC4Q5GLZ8 1057 aaPredicted RBP18.2■□□□□ 0.5
HMGN1-214ENST00000482733 EEF1DP3Q658K8 133 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 SFR1Q86XK3 245 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 COLGALT1Q8NBJ5 622 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 MRPS27Q92552 414 aaKnown RBP18.2■□□□□ 0.5
HMGN1-214ENST00000482733 HVCN1Q96D96 273 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 ZNF558Q96NG5 402 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 FIZ1Q96SL8 496 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms