RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 APOL6Q9BWW8 343 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 CCDC113Q9H0I3 377 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 LMAN2LQ9H0V9 348 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 TMEM134Q9H6X4 195 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 CWH43Q9H720 699 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 RSAD1Q9HA92 442 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 KANSL3Q9P2N6 904 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 ODF2LQ9ULJ1 636 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 ATP6V1DQ9Y5K8 247 aa20.25■□□□□ 0.83
SMIM4-204ENST00000482728 GRM6O15303 877 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 SLC16A4O15374 487 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 FAM13AO94988 1023 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 STAT6P42226 847 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 ALDH7A1P49419 539 aaKnown RBP20.24■□□□□ 0.83
SMIM4-204ENST00000482728 CACNB1Q02641 598 aaPredicted RBP20.24■□□□□ 0.83
SMIM4-204ENST00000482728 KCNT2Q6UVM3 1135 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 SV2BQ7L1I2 683 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 APBB1IPQ7Z5R6 666 aaPredicted RBP20.24■□□□□ 0.83
SMIM4-204ENST00000482728 COLGALT1Q8NBJ5 622 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 LRRC15Q8TF66 581 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 ZNF558Q96NG5 402 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 REEP2Q9BRK0 252 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 ZHX3Q9H4I2 956 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 HCSTQ9UBK5 93 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 USP20Q9Y2K6 914 aa20.24■□□□□ 0.83
SMIM4-204ENST00000482728 TBCAO75347 108 aaKnown RBP20.23■□□□□ 0.83
SMIM4-204ENST00000482728 ITGB1P05556 798 aa20.23■□□□□ 0.83
SMIM4-204ENST00000482728 STRN3Q13033 797 aa20.23■□□□□ 0.83
SMIM4-204ENST00000482728 MYCT1Q8N699 235 aa20.23■□□□□ 0.83
SMIM4-204ENST00000482728 FAM193BQ96PV7 902 aaPredicted RBP20.23■□□□□ 0.83
SMIM4-204ENST00000482728 RNF39Q9H2S5 420 aa20.23■□□□□ 0.83
SMIM4-204ENST00000482728 TBC1D13Q9NVG8 400 aa20.23■□□□□ 0.83
SMIM4-204ENST00000482728 ARHGAP28Q9P2N2 729 aa20.23■□□□□ 0.83
SMIM4-204ENST00000482728 ZDHHC9Q9Y397 364 aa20.23■□□□□ 0.83
SMIM4-204ENST00000482728 HES2Q9Y543 173 aa20.23■□□□□ 0.83
SMIM4-204ENST00000482728 MYH11P35749 1972 aa20.23■□□□□ 0.83
SMIM4-204ENST00000482728 TTLL13PA6NNM8 815 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 H0YCG3 227 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 FGF18O76093 207 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 PPM1AP35813 382 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 GIT2Q14161 759 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 TIGD5Q53EQ6 642 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 NT5DC1Q5TFE4 455 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 ATF7IP2Q5U623 682 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 PDILTQ8N807 584 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 SPPL3Q8TCT6 385 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 MRPL4Q9BYD3 311 aaKnown RBP20.22■□□□□ 0.83
SMIM4-204ENST00000482728 GBP3Q9H0R5 595 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 NXF3Q9H4D5 531 aaKnown RBP20.22■□□□□ 0.83
SMIM4-204ENST00000482728 PDZD7Q9H5P4 517 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 PARVGQ9HBI0 331 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 SPG21Q9NZD8 308 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 PARP2Q9UGN5 583 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 PUF60Q9UHX1 559 aaKnown RBP20.22■□□□□ 0.83
SMIM4-204ENST00000482728 RCOR1Q9UKL0 485 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 GIT1Q9Y2X7 761 aa20.22■□□□□ 0.83
SMIM4-204ENST00000482728 MYH15Q9Y2K3 1946 aa20.21■□□□□ 0.83
SMIM4-204ENST00000482728 CARNS1A5YM72 827 aa20.21■□□□□ 0.83
SMIM4-204ENST00000482728 ZC3H11AO75152 810 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMIM4-204ENST00000482728 KRT85P78386 507 aa20.21■□□□□ 0.83
SMIM4-204ENST00000482728 KRT17Q04695 432 aa20.21■□□□□ 0.83
SMIM4-204ENST00000482728 UBE3AQ05086 875 aa20.21■□□□□ 0.83
SMIM4-204ENST00000482728 MICAL1Q8TDZ2 1067 aa20.21■□□□□ 0.83
SMIM4-204ENST00000482728 POF1BQ8WVV4 589 aa20.21■□□□□ 0.83
SMIM4-204ENST00000482728 GAD1Q99259 594 aa20.21■□□□□ 0.83
SMIM4-204ENST00000482728 TCHPQ9BT92 498 aa20.21■□□□□ 0.83
SMIM4-204ENST00000482728 ARL5CA6NH57 179 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 CSPG5O95196 566 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 POMCP01189 267 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 AKAP5P24588 427 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 BCAR1P56945 870 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 DCAF4L1Q3SXM0 396 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 EEF1DP3Q658K8 133 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 DYMQ7RTS9 669 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 TMEM161BQ8NDZ6 487 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 ACO2Q99798 780 aaKnown RBP20.2■□□□□ 0.82
SMIM4-204ENST00000482728 TARS2Q9BW92 718 aaKnown RBP20.2■□□□□ 0.82
SMIM4-204ENST00000482728 FAM13BQ9NYF5 915 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 PCDHA7Q9UN72 937 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 TNFSF13BQ9Y275 285 aa20.2■□□□□ 0.82
SMIM4-204ENST00000482728 COL4A4P53420 1690 aaPredicted RBP20.19■□□□□ 0.82
SMIM4-204ENST00000482728 TRAK2O60296 914 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 ALDH2P05091 517 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 EDN1P05305 212 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 MAPTP10636 758 aaKnown RBP20.19■□□□□ 0.82
SMIM4-204ENST00000482728 SCP2P22307 547 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 PBX3P40426 434 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 MLH1P40692 756 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 PLCB3Q01970 1234 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
SMIM4-204ENST00000482728 SHC4Q6S5L8 630 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 HAUS6Q7Z4H7 955 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.19■□□□□ 0.82
SMIM4-204ENST00000482728 IQUBQ8NA54 791 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 SPATA32Q96LK8 384 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 NSUN3Q9H649 340 aaKnown RBP20.19■□□□□ 0.82
SMIM4-204ENST00000482728 NRDE2Q9H7Z3 1164 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 KLK14Q9P0G3 267 aa20.19■□□□□ 0.82
SMIM4-204ENST00000482728 BRWD1Q9NSI6 2320 aa20.18■□□□□ 0.82
SMIM4-204ENST00000482728 A0A087X0B3 334 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms