RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 RAB27AP51159 221 aa16.81■□□□□ 0.28
CCM2-215ENST00000482714 CASP5P51878 434 aa16.81■□□□□ 0.28
CCM2-215ENST00000482714 POU5F1Q01860 360 aaKnown RBP16.81■□□□□ 0.28
CCM2-215ENST00000482714 MYBPC2Q14324 1141 aa16.81■□□□□ 0.28
CCM2-215ENST00000482714 ATF7IP2Q5U623 682 aa16.81■□□□□ 0.28
CCM2-215ENST00000482714 SLC27A1Q6PCB7 646 aa16.81■□□□□ 0.28
CCM2-215ENST00000482714 C16orf59Q7L2K0 433 aa16.81■□□□□ 0.28
CCM2-215ENST00000482714 HS2ST1Q7LGA3 356 aa16.81■□□□□ 0.28
CCM2-215ENST00000482714 ERCC4Q92889 916 aaPredicted RBP16.81■□□□□ 0.28
CCM2-215ENST00000482714 DHTKD1Q96HY7 919 aaPredicted RBP16.81■□□□□ 0.28
CCM2-215ENST00000482714 TARS2Q9BW92 718 aaKnown RBP16.81■□□□□ 0.28
CCM2-215ENST00000482714 OSBPL7Q9BZF2 842 aa16.81■□□□□ 0.28
CCM2-215ENST00000482714 MTIF3Q9H2K0 278 aaKnown RBP16.81■□□□□ 0.28
CCM2-215ENST00000482714 TMX1Q9H3N1 280 aa16.81■□□□□ 0.28
CCM2-215ENST00000482714 PIN4Q9Y237 131 aaKnown RBP16.81■□□□□ 0.28
CCM2-215ENST00000482714 CLDN3O15551 220 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 GARTP22102 1010 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 FGFR4P22455 802 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 PROZP22891 400 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 BMP8BP34820 402 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 TMEM132AQ24JP5 1023 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 TMEM240Q5SV17 173 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 SASS6Q6UVJ0 657 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 RTN4RL1Q86UN2 441 aaPredicted RBP16.8■□□□□ 0.28
CCM2-215ENST00000482714 RSPH1Q8WYR4 309 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 BICD1Q96G01 975 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 ADAM2Q99965 735 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 TCHPQ9BT92 498 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 ELAC1Q9H777 363 aaKnown RBP16.8■□□□□ 0.28
CCM2-215ENST00000482714 DACH1Q9UI36 760 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 HNRNPDLO14979 420 aaKnown RBP16.8■□□□□ 0.28
CCM2-215ENST00000482714 MCF2P10911 925 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 HOXD13P35453 343 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 PRCPP42785 496 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 NLRP12P59046 1061 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 DCAF4L1Q3SXM0 396 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 TWF2Q6IBS0 349 aaKnown RBP16.8■□□□□ 0.28
CCM2-215ENST00000482714 MPZL3Q6UWV2 235 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 ZNF365Q70YC5 407 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 C12orf56Q8IXR9 622 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 HACE1Q8IYU2 909 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 ADSSL1Q8N142 457 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 HERVK_113Q902F9 699 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 GDF15Q99988 308 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 FGFBP2Q9BYJ0 223 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 TRAF3IP3Q9Y228 551 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 GDAQ9Y2T3 454 aa16.8■□□□□ 0.28
CCM2-215ENST00000482714 TET1Q8NFU7 2136 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 C9IYK1 514 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 H0YGN5 161 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 PSMA7O14818 248 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 B4GALT5O43286 388 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 LDHAP00338 332 aaKnown RBP16.79■□□□□ 0.28
CCM2-215ENST00000482714 BMP6P22004 513 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 MCL1Q07820 350 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 KCNA1Q09470 495 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 NFIL3Q16649 462 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 CENPPQ6IPU0 288 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 MRPL10Q7Z7H8 261 aaKnown RBP16.79■□□□□ 0.28
CCM2-215ENST00000482714 GLIS3Q8NEA6 775 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 PHOSPHO2Q8TCD6 241 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 PGBD4Q96DM1 585 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 KCTD10Q9H3F6 313 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 KIAA1586Q9HCI6 787 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 UBN1Q9NPG3 1134 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 FAM105AQ9NUU6 356 aa16.79■□□□□ 0.28
CCM2-215ENST00000482714 TYW1Q9NV66 732 aaKnown RBP16.79■□□□□ 0.28
CCM2-215ENST00000482714 TANC1Q9C0D5 1861 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 A0A0B4J269 797 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 PPP1R3GB7ZBB8 358 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 BIN1O00499 593 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 CALUO43852 315 aaPredicted RBP16.78■□□□□ 0.28
CCM2-215ENST00000482714 STAG3L1P0CL83 205 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 ACRP10323 421 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 RPL13P26373 211 aaKnown RBP16.78■□□□□ 0.28
CCM2-215ENST00000482714 MAGEA10P43363 369 aaPredicted RBP16.78■□□□□ 0.28
CCM2-215ENST00000482714 SLC9A9Q8IVB4 645 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 CPB2Q96IY4 423 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 TRIM6Q9C030 488 aaPredicted RBP16.78■□□□□ 0.28
CCM2-215ENST00000482714 PDZD7Q9H5P4 517 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 ANO10Q9NW15 660 aa16.78■□□□□ 0.28
CCM2-215ENST00000482714 TTLL13PA6NNM8 815 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 ABLIM1O14639 778 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 TGFB1I1O43294 461 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 MGEA5O60502 916 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 AMHP03971 560 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 CCNE1P24864 410 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 ERCC5P28715 1186 aaPredicted RBP16.77■□□□□ 0.28
CCM2-215ENST00000482714 LRRC63Q05C16 580 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 EDRF1Q3B7T1 1238 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 UBXN11Q5T124 520 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 ISM2Q6H9L7 571 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCM2-215ENST00000482714 ANP32EQ9BTT0 268 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 TMEM161AQ9NX61 479 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 PCDHB2Q9Y5E7 798 aa16.77■□□□□ 0.28
CCM2-215ENST00000482714 RANBP2P49792 3224 aaKnown RBP16.77■□□□□ 0.28
CCM2-215ENST00000482714 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.76■□□□□ 0.27
CCM2-215ENST00000482714 BICDL2A1A5D9 508 aa16.76■□□□□ 0.27
CCM2-215ENST00000482714 ANKRD63C9JTQ0 380 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms