RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 DDR1Q08345 913 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 LRMPQ12912 555 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 TRIM14Q14142 442 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 HSP90AA2PQ14568 343 aaPredicted RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 KCNB1Q14721 858 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 NONOQ15233 471 aaKnown RBP eCLIP8.57□□□□□ -1.04
SNX13-208ENST00000482558 FXNQ16595 210 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 RPS26P11Q5JNZ5 115 aaPredicted RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 GPATCH4Q5T3I0 446 aaKnown RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 ACBD5Q5T8D3 534 aaPredicted RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 SPECC1LQ69YQ0 1117 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 STYK1Q6J9G0 422 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 DPP8Q6V1X1 898 aaPredicted RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 SMIM5Q71RC9 77 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 VSIG10LQ86VR7 867 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 FOXP4Q8IVH2 680 aaPredicted RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 CCAR2Q8N163 923 aaKnown RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 ZSWIM2Q8NEG5 633 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 ATL2Q8NHH9 583 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 NOC3LQ8WTT2 800 aaKnown RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 TEKT1Q969V4 418 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 DHX58Q96C10 678 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 CCDC51Q96ER9 411 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 RUSC1Q9BVN2 902 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 RIOX1Q9H6W3 641 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 PPCSQ9HAB8 311 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 SYNPO2Q9UMS6 1093 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 SOX13Q9UN79 622 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 MRPS23Q9Y3D9 190 aaKnown RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 NFE2L3Q9Y4A8 694 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 DAGLAQ9Y4D2 1042 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 LTBP1Q14766 1721 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 QSER1Q2KHR3 1735 aa8.57□□□□□ -1.04
SNX13-208ENST00000482558 DDX60LQ5H9U9 1706 aaKnown RBP8.57□□□□□ -1.04
SNX13-208ENST00000482558 E2F8A0AVK6 867 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 STXBP3O00186 592 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 CTIFO43310 598 aaKnown RBP8.56□□□□□ -1.04
SNX13-208ENST00000482558 AKAP10O43572 662 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 GAS2O43903 313 aaKnown RBP8.56□□□□□ -1.04
SNX13-208ENST00000482558 TTLL1O95922 423 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 C8AP07357 584 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 MCM7P33993 719 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 NAPAP54920 295 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 GABPAQ06546 454 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 PCDH1Q08174 1060 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 TRAF1Q13077 416 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 C21orf62-AS1Q17RA5 79 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 GLIPR1L2Q4G1C9 344 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 ZNF658Q5TYW1 1059 aaPredicted RBP8.56□□□□□ -1.04
SNX13-208ENST00000482558 HEATR3Q7Z4Q2 680 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 C4orf32Q8N8J7 132 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 TEX19Q8NA77 164 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 SUPT20HQ8NEM7 779 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 ERCC4Q92889 916 aaPredicted RBP8.56□□□□□ -1.04
SNX13-208ENST00000482558 IQCDQ96DY2 449 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 DYNLL2Q96FJ2 89 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 HSD3B7Q9H2F3 369 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 MTMR4Q9NYA4 1195 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 SERPINB13Q9UIV8 391 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 RWDD2AQ9UIY3 292 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 PCDHA6Q9UN73 950 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 PCDHA8Q9Y5H6 950 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNX13-208ENST00000482558 FOCADQ5VW36 1801 aa8.56□□□□□ -1.04
SNX13-208ENST00000482558 ITIH6Q6UXX5 1313 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 SYNRGQ9UMZ2 1314 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 MYH1P12882 1939 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 IGKV6D-41A0A0C4DH26 115 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 SMCO2A6NFE2 343 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 LRRC10BA6NIK2 292 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 H7C1D1 291 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 SNHG28P0DPA3 235 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 STAT6P42226 847 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 EIF6P56537 245 aaKnown RBP8.55□□□□□ -1.04
SNX13-208ENST00000482558 GRIN1Q05586 938 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 NR1I3Q14994 352 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 TMEM266Q2M3C6 531 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 SPECC1Q5M775 1068 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 STRIP1Q5VSL9 837 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 RRAGBQ5VZM2 374 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 FBXL19Q6PCT2 694 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 CCDC81Q6ZN84 652 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 SV2BQ7L1I2 683 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 VN1R5Q7Z5H4 357 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 NEK8Q86SG6 692 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 REXO1Q8N1G1 1221 aaKnown RBP8.55□□□□□ -1.04
SNX13-208ENST00000482558 PDCL2Q8N4E4 241 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 FAM169BQ8N8A8 192 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 NKD1Q969G9 470 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 SHISA4Q96DD7 197 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 EPSTI1Q96J88 318 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 ZDHHC15Q96MV8 337 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 PANX2Q96RD6 677 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 OSBPL1AQ9BXW6 950 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 ASPSCR1Q9BZE9 553 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 DISC1Q9NRI5 854 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 ZNF69Q9UC07 566 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 SAP30BPQ9UHR5 308 aaKnown RBP8.55□□□□□ -1.04
SNX13-208ENST00000482558 PFDN2Q9UHV9 154 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 JAG2Q9Y219 1238 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms