RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 LPPQ93052 612 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 RELTQ969Z4 430 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 TAAR9Q96RI9 348 aa7.45□□□□□ -1.22
SF3B1-210ENST00000482158 C14orf93Q9H972 538 aaKnown RBP7.45□□□□□ -1.22
SF3B1-210ENST00000482158 DBX1A6NMT0 343 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 MTSS1O43312 755 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 B4GALT4O60513 344 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 U2AF1L5P0DN76 240 aaPredicted RBP7.44□□□□□ -1.22
SF3B1-210ENST00000482158 BPIFB4P59827 614 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 U2AF1Q01081 240 aaKnown RBP eCLIP7.44□□□□□ -1.221e-13■■■□□ 18.8
SF3B1-210ENST00000482158 DSC2Q02487 901 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 KIAA2012Q0VF49 1180 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 SAFB2Q14151 953 aaKnown RBP eCLIP7.44□□□□□ -1.22
SF3B1-210ENST00000482158 MINDY4Q4G0A6 757 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 TOX2Q96NM4 488 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 GPHA2Q96T91 129 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 SLC6A15Q9H2J7 730 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 NMRK2Q9NPI5 230 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 TRPS1Q9UHF7 1281 aa7.44□□□□□ -1.22
SF3B1-210ENST00000482158 SAP30BPQ9UHR5 308 aaKnown RBP7.44□□□□□ -1.22
SF3B1-210ENST00000482158 VSTM5A8MXK1 200 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 WNT10BO00744 389 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 OFD1O75665 1012 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 VSIG10L2P0DP72 767 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 HSPA6P17066 643 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 WNT3AP56704 352 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 GJA9P57773 515 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 GFOD2Q3B7J2 385 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 NOL8Q76FK4 1167 aaKnown RBP7.43□□□□□ -1.22
SF3B1-210ENST00000482158 ANKRD53Q8N9V6 530 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 KAT5Q92993 513 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 MVB12AQ96EY5 273 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 ENKD1Q9H0I2 346 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 JADE2Q9NQC1 790 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 GEMIN8Q9NWZ8 242 aaKnown RBP7.43□□□□□ -1.22
SF3B1-210ENST00000482158 OBP2AQ9NY56 170 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 NR2E1Q9Y466 385 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 PCDHB1Q9Y5F3 818 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 PCDHA13Q9Y5I0 950 aa7.43□□□□□ -1.22
SF3B1-210ENST00000482158 FAM171A2A8MVW0 826 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 ADCY6O43306 1168 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 PHF2O75151 1096 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 SREBF1P36956 1147 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 TBX4P57082 545 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 ADGRE4PQ86SQ3 457 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 MARCH10Q8NA82 808 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-210ENST00000482158 DIS3LQ8TF46 1054 aaKnown RBP7.42□□□□□ -1.22
SF3B1-210ENST00000482158 ZNF480Q8WV37 535 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 HDAC10Q969S8 669 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 RPL10LQ96L21 214 aaKnown RBP7.42□□□□□ -1.22
SF3B1-210ENST00000482158 DMRTA2Q96SC8 542 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 GPRC5DQ9NZD1 345 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 DDX20Q9UHI6 824 aaKnown RBP7.42□□□□□ -1.22
SF3B1-210ENST00000482158 DUSP10Q9Y6W6 482 aa7.42□□□□□ -1.22
SF3B1-210ENST00000482158 GOLGA6CA6NDK9 693 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 GOLGA6BA6NDN3 693 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 KIF3BO15066 747 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 JUNP05412 331 aaKnown RBP7.41□□□□□ -1.22
SF3B1-210ENST00000482158 GOLGA6DP0CG33 693 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 ECHS1P30084 290 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 GNALP38405 381 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 FAM124AQ86V42 546 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 GRAMD1CQ8IYS0 662 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 OR7D4Q8NG98 312 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 RABGGTAQ92696 567 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 ACO2Q99798 780 aaKnown RBP7.41□□□□□ -1.22
SF3B1-210ENST00000482158 AGO3Q9H9G7 860 aaKnown RBP7.41□□□□□ -1.22
SF3B1-210ENST00000482158 BCO1Q9HAY6 547 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 GOLGA6AQ9NYA3 693 aa7.41□□□□□ -1.22
SF3B1-210ENST00000482158 ITGA10O75578 1167 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 GALEQ14376 348 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 BORAQ6PGQ7 559 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 FAM180AQ6UWF9 173 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 MIGA2Q7L4E1 593 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 SP8Q8IXZ3 490 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 NSUN6Q8TEA1 469 aaKnown RBP7.4□□□□□ -1.22
SF3B1-210ENST00000482158 KCNC2Q96PR1 638 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 MAP3K14Q99558 947 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 C7orf25Q9BPX7 421 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 PDCD2LQ9BRP1 358 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 GABBR1Q9UBS5 961 aa7.4□□□□□ -1.22
SF3B1-210ENST00000482158 PMS2P1A4D2B8 440 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 A6NNZ2 444 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 SLC26A4O43511 780 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 ENDOD1O94919 500 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 AMY1AP04745 511 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 CRHR1P34998 444 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 CASRP41180 1078 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 PPP2CBP62714 309 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 PPP2CAP67775 309 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 TARDBPQ13148 414 aaKnown RBP eCLIP7.39□□□□□ -1.23
SF3B1-210ENST00000482158 GBX1Q14549 363 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 GRM3Q14832 879 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 PGS1Q32NB8 556 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 CYB5RLQ6IPT4 315 aa7.39□□□□□ -1.23
SF3B1-210ENST00000482158 RHOT1Q8IXI2 618 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms