RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 TDRD15B5MCY1 1934 aaKnown RBP12.89□□□□□ -0.35
GARNL3-217ENST00000481875 CCDC194A0A1B0GVG4 234 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 MEIS3P2A8K0S8 358 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 C2CD4DB7Z1M9 353 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 LYPLA2O95372 231 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 ALDH2P05091 517 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 NCLP19338 710 aaKnown RBP12.88□□□□□ -0.35
GARNL3-217ENST00000481875 AXLP30530 894 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 LAMTOR4Q0VGL1 99 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
GARNL3-217ENST00000481875 PTPN14Q15678 1187 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 LETM2Q2VYF4 491 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 UBXN11Q5T124 520 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 LARP1BQ659C4 914 aaKnown RBP12.88□□□□□ -0.35
GARNL3-217ENST00000481875 CYP26C1Q6V0L0 522 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 C15orf39Q6ZRI6 1047 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 KSR1Q8IVT5 923 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 GPR65Q8IYL9 337 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 SLFN12Q8IYM2 578 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 KREMEN2Q8NCW0 462 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
GARNL3-217ENST00000481875 LPPQ93052 612 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 CCDC51Q96ER9 411 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 VN1R3Q9BXE9 311 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 NFKBIZQ9BYH8 718 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 ZSWIM4Q9H7M6 989 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 MINDY3Q9H8M7 445 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 WRAP73Q9P2S5 460 aaPredicted RBP12.88□□□□□ -0.35
GARNL3-217ENST00000481875 DOCK8Q8NF50 2099 aa12.88□□□□□ -0.35
GARNL3-217ENST00000481875 ZMYM2Q9UBW7 1377 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-217ENST00000481875 PROB1E7EW31 1015 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 H3BQV1 296 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 DDHD2O94830 711 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 PDCP20941 246 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
GARNL3-217ENST00000481875 SLC11A1P49279 550 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 CLCN4P51793 760 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 NPEPPSP55786 919 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 GUCY1B3Q02153 619 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 RNASELQ05823 741 aaKnown RBP12.87□□□□□ -0.35
GARNL3-217ENST00000481875 NBR1Q14596 966 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 GPR149Q86SP6 731 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 ZNF280BQ86YH2 543 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 RNF168Q8IYW5 571 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-217ENST00000481875 CMASQ8NFW8 434 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-217ENST00000481875 URGCPQ8TCY9 931 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 CEP170P1Q96L14 293 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 HSD17B14Q9BPX1 270 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 LXNQ9BS40 222 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 SFXN1Q9H9B4 322 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 RSAD1Q9HA92 442 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 DNAJB4Q9UDY4 337 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 KCNJ14Q9UNX9 436 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 SSX2IPQ9Y2D8 614 aa12.87□□□□□ -0.35
GARNL3-217ENST00000481875 B4GALT3O60512 393 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 SLITRK3O94933 977 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 BRD1O95696 1058 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 XRCC6P12956 609 aaKnown RBP eCLIP12.86□□□□□ -0.35
GARNL3-217ENST00000481875 EPCAMP16422 314 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 CLCN5P51795 746 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 VCPP55072 806 aaKnown RBP12.86□□□□□ -0.35
GARNL3-217ENST00000481875 PTENP60484 403 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 DSC1Q08554 894 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
GARNL3-217ENST00000481875 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 TNFRSF25Q93038 417 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 KLHL5Q96PQ7 755 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 EMILIN2Q9BXX0 1053 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 GJB4Q9NTQ9 266 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 PLXNA3P51805 1871 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 GVINP1Q7Z2Y8 2422 aa12.86□□□□□ -0.35
GARNL3-217ENST00000481875 ZNF292O60281 2723 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
GARNL3-217ENST00000481875 CCNT1O60563 726 aaKnown RBP12.85□□□□□ -0.35
GARNL3-217ENST00000481875 SOD2P04179 222 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 CNPP09543 421 aaKnown RBP12.85□□□□□ -0.35
GARNL3-217ENST00000481875 SRGAP2CP0DJJ0 459 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 EMC2Q15006 297 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 RARS2Q5T160 578 aaKnown RBP12.85□□□□□ -0.35
GARNL3-217ENST00000481875 OTOP3Q7RTS5 596 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 ZBTB33Q86T24 672 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 CABP7Q86V35 215 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 COLGALT2Q8IYK4 626 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 TDRD5Q8NAT2 981 aaKnown RBP12.85□□□□□ -0.35
GARNL3-217ENST00000481875 TMEM87AQ8NBN3 555 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 RNF149Q8NC42 400 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 SMG8Q8ND04 991 aaKnown RBP12.85□□□□□ -0.35
GARNL3-217ENST00000481875 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 AUTS2Q8WXX7 1259 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 TMEM143Q96AN5 459 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 PHOX2BQ99453 314 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 APOL5Q9BWW9 433 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 RXFP1Q9HBX9 757 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms