RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 BTNL9Q6UXG8 535 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 LARP4Q71RC2 724 aaKnown RBP eCLIP5.01□□□□□ -1.618e-8■□□□□ 10
CBX3-207ENST00000481300 MIER2Q8N344 545 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 GLB1L3Q8NCI6 653 aaPredicted RBP5.01□□□□□ -1.61
CBX3-207ENST00000481300 JPH3Q8WXH2 748 aaPredicted RBP5.01□□□□□ -1.61
CBX3-207ENST00000481300 LPPQ93052 612 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 NKD2Q969F2 451 aaPredicted RBP5.01□□□□□ -1.61
CBX3-207ENST00000481300 HSPBAP1Q96EW2 488 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 CAMKK2Q96RR4 588 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 CDK5RAP1Q96SZ6 601 aaKnown RBP5.01□□□□□ -1.61
CBX3-207ENST00000481300 FDXACB1Q9BRP7 624 aaPredicted RBP5.01□□□□□ -1.61
CBX3-207ENST00000481300 SOX7Q9BT81 388 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 ADI1Q9BV57 179 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 KIAA1683Q9H0B3 1180 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 CSRNP2Q9H175 543 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 OR10A2Q9H208 303 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 SEC61A2Q9H9S3 476 aa5.01□□□□□ -1.61
CBX3-207ENST00000481300 FOXS1O43638 330 aa5□□□□□ -1.61
CBX3-207ENST00000481300 PRAMEF4O60810 478 aa5□□□□□ -1.61
CBX3-207ENST00000481300 LY86O95711 162 aa5□□□□□ -1.61
CBX3-207ENST00000481300 SCGB1D2O95969 90 aa5□□□□□ -1.61
CBX3-207ENST00000481300 C5AR1P21730 350 aa5□□□□□ -1.61
CBX3-207ENST00000481300 MEF2AQ02078 507 aaPredicted RBP5□□□□□ -1.61
CBX3-207ENST00000481300 KIF23Q02241 960 aaPredicted RBP5□□□□□ -1.61
CBX3-207ENST00000481300 CD69Q07108 199 aa5□□□□□ -1.61
CBX3-207ENST00000481300 SPDYAQ5MJ70 313 aa5□□□□□ -1.61
CBX3-207ENST00000481300 GJC2Q5T442 439 aaPredicted RBP5□□□□□ -1.61
CBX3-207ENST00000481300 AGBL4Q5VU57 503 aa5□□□□□ -1.61
CBX3-207ENST00000481300 TCTN3Q6NUS6 607 aa5□□□□□ -1.61
CBX3-207ENST00000481300 USP30Q70CQ3 517 aa5□□□□□ -1.61
CBX3-207ENST00000481300 WDR75Q8IWA0 830 aaKnown RBP5□□□□□ -1.61
CBX3-207ENST00000481300 CMTR2Q8IYT2 770 aaKnown RBP5□□□□□ -1.61
CBX3-207ENST00000481300 UNC5BQ8IZJ1 945 aa5□□□□□ -1.61
CBX3-207ENST00000481300 PPP1R14CQ8TAE6 165 aa5□□□□□ -1.61
CBX3-207ENST00000481300 ZNF747Q9BV97 191 aa5□□□□□ -1.61
CBX3-207ENST00000481300 RTFDC1Q9BY42 306 aaPredicted RBP5□□□□□ -1.61
CBX3-207ENST00000481300 RHOBTB2Q9BYZ6 727 aa5□□□□□ -1.61
CBX3-207ENST00000481300 GREM2Q9H772 168 aa5□□□□□ -1.61
CBX3-207ENST00000481300 TCF7L1Q9HCS4 588 aa5□□□□□ -1.61
CBX3-207ENST00000481300 CHPF2Q9P2E5 772 aa5□□□□□ -1.61
CBX3-207ENST00000481300 SRRDQ9UH36 339 aa5□□□□□ -1.61
CBX3-207ENST00000481300 DNM3Q9UQ16 869 aa5□□□□□ -1.61
CBX3-207ENST00000481300 TCAF1Q9Y4C2 921 aa5□□□□□ -1.61
CBX3-207ENST00000481300 RBM8AQ9Y5S9 174 aaKnown RBP5□□□□□ -1.61
CBX3-207ENST00000481300 MUSKO15146 869 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 TSPAN6O43657 245 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 U2AF1L5P0DN76 240 aaPredicted RBP4.99□□□□□ -1.61
CBX3-207ENST00000481300 GAAP10253 952 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 ADKP55263 362 aaKnown RBP4.99□□□□□ -1.61
CBX3-207ENST00000481300 U2AF1Q01081 240 aaKnown RBP eCLIP4.99□□□□□ -1.61
CBX3-207ENST00000481300 LRRC41Q15345 812 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 UAP1L1Q3KQV9 507 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 KRT40Q6A162 431 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 THEMISQ8N1K5 641 aaPredicted RBP4.99□□□□□ -1.61
CBX3-207ENST00000481300 PLA2G15Q8NCC3 412 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 SLC7A6OSQ96CW6 309 aaPredicted RBP4.99□□□□□ -1.61
CBX3-207ENST00000481300 CCDC136Q96JN2 1154 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 SORCS2Q96PQ0 1159 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 LRRC37BQ96QE4 947 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 LMF1Q96S06 567 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 NUP88Q99567 741 aaPredicted RBP4.99□□□□□ -1.61
CBX3-207ENST00000481300 C14orf93Q9H972 538 aaKnown RBP4.99□□□□□ -1.61
CBX3-207ENST00000481300 RBM12Q9NTZ6 932 aaKnown RBP4.99□□□□□ -1.61
CBX3-207ENST00000481300 PNMA8BQ9ULN7 279 aaPredicted RBP4.99□□□□□ -1.61
CBX3-207ENST00000481300 NOB1Q9ULX3 412 aaKnown RBP4.99□□□□□ -1.61
CBX3-207ENST00000481300 NR2E1Q9Y466 385 aa4.99□□□□□ -1.61
CBX3-207ENST00000481300 RPTORQ8N122 1335 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 A0A1W2PR48 441 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 AKR1B10O60218 316 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 PHF2O75151 1096 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 RFPL1O75677 317 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 AMHP03971 560 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 SLPIP03973 132 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 LTA4HP09960 611 aaKnown RBP4.98□□□□□ -1.61
CBX3-207ENST00000481300 GSPT1P15170 499 aaKnown RBP4.98□□□□□ -1.61
CBX3-207ENST00000481300 CYP2C19P33261 490 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 ACVRL1P37023 503 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 TCIRG1Q13488 830 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 HSP90AB2PQ58FF8 381 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 CLEC14AQ86T13 490 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 MYO1HQ8N1T3 1032 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 OR14K1Q8NGZ2 314 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 RIN2Q8WYP3 895 aaPredicted RBP4.98□□□□□ -1.61
CBX3-207ENST00000481300 TSR2Q969E8 191 aaKnown RBP4.98□□□□□ -1.61
CBX3-207ENST00000481300 NEIL1Q96FI4 390 aaPredicted RBP4.98□□□□□ -1.61
CBX3-207ENST00000481300 VPS11Q9H270 941 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 TUBD1Q9UJT1 453 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 TESMINQ9Y4I5 508 aa4.98□□□□□ -1.61
CBX3-207ENST00000481300 CTDP1Q9Y5B0 961 aaPredicted RBP4.98□□□□□ -1.61
CBX3-207ENST00000481300 C2orf78A6NCI8 922 aa4.97□□□□□ -1.61
CBX3-207ENST00000481300 GOLGA6CA6NDK9 693 aa4.97□□□□□ -1.61
CBX3-207ENST00000481300 GOLGA6BA6NDN3 693 aa4.97□□□□□ -1.61
CBX3-207ENST00000481300 FAM171A2A8MVW0 826 aa4.97□□□□□ -1.61
CBX3-207ENST00000481300 ARHGAP6O43182 974 aa4.97□□□□□ -1.61
CBX3-207ENST00000481300 DTNBO60941 627 aa4.97□□□□□ -1.61
CBX3-207ENST00000481300 ALDH1A2O94788 518 aa4.97□□□□□ -1.61
CBX3-207ENST00000481300 TOX4O94842 621 aa4.97□□□□□ -1.61
CBX3-207ENST00000481300 ZRANB2O95218 330 aaKnown RBP eCLIP4.97□□□□□ -1.61
CBX3-207ENST00000481300 GOLGA6DP0CG33 693 aa4.97□□□□□ -1.61
CBX3-207ENST00000481300 CTSSP25774 331 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms