RNA–Protein interactions for RNA: ENST00000481212.5

SPTA1-205, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-205ENST00000481212 EYA3Q99504 573 aa8.33□□□□□ -1.08
SPTA1-205ENST00000481212 MXD3Q9BW11 206 aa8.33□□□□□ -1.08
SPTA1-205ENST00000481212 SPTLC3Q9NUV7 552 aa8.33□□□□□ -1.08
SPTA1-205ENST00000481212 OXSMQ9NWU1 459 aa8.33□□□□□ -1.08
SPTA1-205ENST00000481212 DBR1Q9UK59 544 aaKnown RBP8.33□□□□□ -1.08
SPTA1-205ENST00000481212 APOBEC2Q9Y235 224 aaKnown RBP8.33□□□□□ -1.08
SPTA1-205ENST00000481212 YBX2Q9Y2T7 364 aaKnown RBP8.33□□□□□ -1.08
SPTA1-205ENST00000481212 RTL9Q8NET4 1388 aa8.33□□□□□ -1.08
SPTA1-205ENST00000481212 SCO2A0A1W2PP80 73 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 ZC3H12DA2A288 527 aaKnown RBP8.32□□□□□ -1.08
SPTA1-205ENST00000481212 F8W031 263 aaPredicted RBP8.32□□□□□ -1.08
SPTA1-205ENST00000481212 CHL1O00533 1208 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 MAN2B1O00754 1011 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 KCNK3O14649 394 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 SLC27A2O14975 620 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 CYBBP04839 570 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 MPOP05164 745 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 GP2P55259 537 aaKnown RBP8.32□□□□□ -1.08
SPTA1-205ENST00000481212 TMPRSS15P98073 1019 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 IRF9Q00978 393 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 SF3B3Q15393 1217 aaKnown RBP8.32□□□□□ -1.08
SPTA1-205ENST00000481212 PLEKHG6Q3KR16 790 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 NECAB2Q7Z6G3 386 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 PHOSPHO1Q8TCT1 267 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 KIRREL1Q96J84 757 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 MYD88Q99836 296 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 ISCA1Q9BUE6 129 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 RNF32Q9H0A6 362 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 SRPK3Q9UPE1 567 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 ATP23Q9Y6H3 246 aa8.32□□□□□ -1.08
SPTA1-205ENST00000481212 CDHR2Q9BYE9 1310 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 SGSM2O43147 1006 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 SRGAP3O43295 1099 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 CLASP2O75122 1294 aaKnown RBP8.31□□□□□ -1.08
SPTA1-205ENST00000481212 HIP1RO75146 1068 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 DBHP09172 617 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 RPS12P25398 132 aaKnown RBP8.31□□□□□ -1.08
SPTA1-205ENST00000481212 LMOD3Q0VAK6 560 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 NR1I3Q14994 352 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 MILR1Q7Z6M3 343 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 CD244Q9BZW8 370 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 PUS7LQ9H0K6 701 aaKnown RBP8.31□□□□□ -1.08
SPTA1-205ENST00000481212 IRF2BPLQ9H1B7 796 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 TNFRSF12AQ9NP84 129 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 EMC7Q9NPA0 242 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 MYOTQ9UBF9 498 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 DBF4Q9UBU7 674 aaPredicted RBP8.31□□□□□ -1.08
SPTA1-205ENST00000481212 HDAC9Q9UKV0 1011 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 SIT1Q9Y3P8 196 aa8.31□□□□□ -1.08
SPTA1-205ENST00000481212 ARFGEF2Q9Y6D5 1785 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 SCDO00767 359 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 ULK1O75385 1050 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 ERVFRD-1P60508 538 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 FAPQ12884 760 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 DDX10Q13206 875 aaKnown RBP8.3□□□□□ -1.08
SPTA1-205ENST00000481212 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 FIGNQ5HY92 759 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 ARTNQ5T4W7 220 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 IQSEC1Q6DN90 963 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 KCTD1Q719H9 257 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 RBM12BQ8IXT5 1001 aaKnown RBP8.3□□□□□ -1.08
SPTA1-205ENST00000481212 EFHBQ8N7U6 833 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 RXFP1Q9HBX9 757 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 BABAM1Q9NWV8 329 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 ASH2LQ9UBL3 628 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 PCDHB4Q9Y5E5 795 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 CASP8AP2Q9UKL3 1982 aa8.3□□□□□ -1.08
SPTA1-205ENST00000481212 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-205ENST00000481212 KATNA1O75449 491 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 EPHA5P54756 1037 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 ITKQ08881 620 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 TUSC3Q13454 348 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 SLC9A5Q14940 896 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 WDR43Q15061 677 aaKnown RBP eCLIP8.29□□□□□ -1.08
SPTA1-205ENST00000481212 FYB2Q5VWT5 728 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 BTBD8Q5XKL5 378 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-205ENST00000481212 CTU1Q7Z7A3 348 aaKnown RBP8.29□□□□□ -1.08
SPTA1-205ENST00000481212 ATG4DQ86TL0 474 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-205ENST00000481212 RASAL3Q86YV0 1011 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 RUNDC1Q96C34 613 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 MYOZ2Q9NPC6 264 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 HYPKQ9NX55 129 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 H2AFY2Q9P0M6 372 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-205ENST00000481212 FZD1Q9UP38 647 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 SPO11Q9Y5K1 396 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 NUP98P52948 1817 aa8.29□□□□□ -1.08
SPTA1-205ENST00000481212 NUDT19A8MXV4 375 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 S100BP04271 92 aaPredicted RBP8.28□□□□□ -1.08
SPTA1-205ENST00000481212 SLC9A1P19634 815 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 SDHBP21912 280 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 CCDC152Q4G0S7 254 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 ADGRF1Q5T601 910 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 ANKRD18AQ8IVF6 992 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 NOSTRINQ8IVI9 506 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 KIAA1958Q8N8K9 716 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 CLEC4DQ8WXI8 215 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 DLG3Q92796 817 aa8.28□□□□□ -1.08
SPTA1-205ENST00000481212 INTS4Q96HW7 963 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms