RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 LINC01565O15544 149 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 NPTXRO95502 500 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 PRKCBP05771 671 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 GALTP07902 379 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 SYT1P21579 422 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 DLX2Q07687 328 aaPredicted RBP18.78■□□□□ 0.6
HSPG2-209ENST00000480900 DUSP6Q16828 381 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 PLPP4Q5VZY2 271 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 RINT1Q6NUQ1 792 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 RBM23Q86U06 439 aaKnown RBP18.78■□□□□ 0.6
HSPG2-209ENST00000480900 ZNF280BQ86YH2 543 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 IGSF21Q96ID5 467 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 PNMA5Q96PV4 448 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 TMEM175Q9BSA9 504 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 TIPINQ9BVW5 301 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 GBP3Q9H0R5 595 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 RNF39Q9H2S5 420 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 NXF3Q9H4D5 531 aaKnown RBP18.78■□□□□ 0.6
HSPG2-209ENST00000480900 DNAJB4Q9UDY4 337 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 DAXXQ9UER7 740 aaPredicted RBP18.78■□□□□ 0.6
HSPG2-209ENST00000480900 GIT1Q9Y2X7 761 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 HES2Q9Y543 173 aa18.78■□□□□ 0.6
HSPG2-209ENST00000480900 C5orf42Q9H799 3197 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 ARL5CA6NH57 179 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 ACKR2O00590 384 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 B4GALT3O60512 393 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 HIP1RO75146 1068 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 SLC11A1P49279 550 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 NDUFV1P49821 464 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 AFF1P51825 1210 aaKnown RBP18.77■□□□□ 0.6
HSPG2-209ENST00000480900 PRPF4BQ13523 1007 aaKnown RBP18.77■□□□□ 0.6
HSPG2-209ENST00000480900 ZRSR1Q15695 479 aaKnown RBP18.77■□□□□ 0.6
HSPG2-209ENST00000480900 TMEM119Q4V9L6 283 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 C1orf186Q6ZWK4 172 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 TMC7Q7Z402 723 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 TMEM173Q86WV6 379 aaPredicted RBP18.77■□□□□ 0.6
HSPG2-209ENST00000480900 SNX21Q969T3 373 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 CDK5RAP3Q96JB5 506 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 DRC1Q96MC2 740 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 FAM193BQ96PV7 902 aaPredicted RBP18.77■□□□□ 0.6
HSPG2-209ENST00000480900 GAD1Q99259 594 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 RUSC1Q9BVN2 902 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 PDZD7Q9H5P4 517 aa18.77■□□□□ 0.6
HSPG2-209ENST00000480900 DDHD2O94830 711 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 GLP2RO95838 553 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 POMCP01189 267 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 IL9P15248 144 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 GUCY2CP25092 1073 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 MLH1P40692 756 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 MAPK7Q13164 816 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 DMP1Q13316 513 aaPredicted RBP18.76■□□□□ 0.59
HSPG2-209ENST00000480900 SMAD4Q13485 552 aaKnown RBP18.76■□□□□ 0.59
HSPG2-209ENST00000480900 SMC1AQ14683 1233 aaKnown RBP18.76■□□□□ 0.59
HSPG2-209ENST00000480900 BMS1Q14692 1282 aaKnown RBP18.76■□□□□ 0.59
HSPG2-209ENST00000480900 SF3A1Q15459 793 aaKnown RBP18.76■□□□□ 0.59
HSPG2-209ENST00000480900 DDX53Q86TM3 631 aaKnown RBP18.76■□□□□ 0.59
HSPG2-209ENST00000480900 CABP7Q86V35 215 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 CDR2LQ86X02 465 aaPredicted RBP18.76■□□□□ 0.59
HSPG2-209ENST00000480900 FAM178BQ8IXR5 827 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 DAW1Q8N136 415 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 MSLNLQ96KJ4 702 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 KIFC3Q9BVG8 833 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 APOL6Q9BWW8 343 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 C17orf75Q9HAS0 396 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 POLD4Q9HCU8 107 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 CLEC1BQ9P126 229 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 CD207Q9UJ71 328 aa18.76■□□□□ 0.59
HSPG2-209ENST00000480900 TTLL13PA6NNM8 815 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 HIDE1A8MVS5 230 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 PER2O15055 1255 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 LONP1P36776 959 aaKnown RBP18.75■□□□□ 0.59
HSPG2-209ENST00000480900 DSC1Q08554 894 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 COASYQ13057 564 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 RESTQ13127 1097 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 TMEM132AQ24JP5 1023 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 VPS52Q8N1B4 723 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 MRPL43Q8N983 215 aaKnown RBP18.75■□□□□ 0.59
HSPG2-209ENST00000480900 SYT2Q8N9I0 419 aaPredicted RBP18.75■□□□□ 0.59
HSPG2-209ENST00000480900 BCL7CQ8WUZ0 217 aaPredicted RBP18.75■□□□□ 0.59
HSPG2-209ENST00000480900 ZFP42Q96MM3 310 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 ADPGKQ9BRR6 497 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 ZBP1Q9H171 429 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 KCND2Q9NZV8 630 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 STK39Q9UEW8 545 aa18.75■□□□□ 0.59
HSPG2-209ENST00000480900 PHLPP2Q6ZVD8 1323 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 C2orf71A6NGG8 1288 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 CCDC169A6NNP5 214 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 MBTPS2O43462 519 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 ALDH2P05091 517 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 EDN1P05305 212 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 SRGAP2BP0DMP2 458 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 LIG1P18858 919 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 UBA7P41226 1012 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 NPTX2P47972 431 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 SCNN1GP51170 649 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 SLC12A3P55017 1021 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 PEX3P56589 373 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 SMAD2Q15796 467 aaKnown RBP18.74■□□□□ 0.59
HSPG2-209ENST00000480900 CLUL1Q15846 466 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 COLGALT2Q8IYK4 626 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms