RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 IGKV6-21A0A0C4DH24 114 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 AKR1B15C9JRZ8 316 aaPredicted RBP11.4□□□□□ -0.58
LINC00173-203ENST00000480237 MAGEB2O15479 319 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 F2P00734 622 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 IGHA2P01877 340 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 MYL3P08590 195 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 TRIM21P19474 475 aaKnown RBP11.4□□□□□ -0.58
LINC00173-203ENST00000480237 HOXD10P28358 340 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 LIG4P49917 911 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 BEX3Q00994 111 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 LAMTOR4Q0VGL1 99 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 MYBPC2Q14324 1141 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 SWT1Q5T5J6 900 aaKnown RBP11.4□□□□□ -0.58
LINC00173-203ENST00000480237 RHPN2Q8IUC4 686 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 CNGA4Q8IV77 575 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 XXYLT1Q8NBI6 393 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 TRPV1Q8NER1 839 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 CPLX3Q8WVH0 158 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 PRPF31Q8WWY3 499 aaKnown RBP11.4□□□□□ -0.58
LINC00173-203ENST00000480237 RNF166Q96A37 237 aaPredicted RBP11.4□□□□□ -0.58
LINC00173-203ENST00000480237 ERGIC2Q96RQ1 377 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 CBWD1Q9BRT8 395 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 PCIF1Q9H4Z3 704 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 HSPBP1Q9NZL4 362 aa11.4□□□□□ -0.58
LINC00173-203ENST00000480237 SUCLA2Q9P2R7 463 aaPredicted RBP11.4□□□□□ -0.58
LINC00173-203ENST00000480237 SCN5AQ14524 2016 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 K7ERI5 159 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 ADCY3O60266 1144 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 RNF40O75150 1001 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 DUSP11O75319 330 aaKnown RBP11.39□□□□□ -0.59
LINC00173-203ENST00000480237 AFPP02771 609 aaKnown RBP11.39□□□□□ -0.59
LINC00173-203ENST00000480237 GYPCP04921 128 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
LINC00173-203ENST00000480237 SRGAP2CP0DJJ0 459 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 KRT13P13646 458 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 KLRC1P26715 233 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 TMOD1P28289 359 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 MATR3P43243 847 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00173-203ENST00000480237 ADKP55263 362 aaKnown RBP11.39□□□□□ -0.59
LINC00173-203ENST00000480237 CCZ1BP86790 482 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 CCZ1P86791 482 aaPredicted RBP11.39□□□□□ -0.59
LINC00173-203ENST00000480237 RBL2Q08999 1139 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 KCNH2Q12809 1159 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 FSCN1Q16658 493 aaKnown RBP11.39□□□□□ -0.59
LINC00173-203ENST00000480237 KIAA0753Q2KHM9 967 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 TAS1R3Q7RTX0 852 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 RNF149Q8NC42 400 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 POMGNT1Q8WZA1 660 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 ZBTB10Q96DT7 871 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 ERO1AQ96HE7 468 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 NLRP4Q96MN2 994 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 NUP58Q9BVL2 599 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 KATNAL1Q9BW62 490 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 C2orf40Q9H1Z8 148 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 DMAC2Q9NW81 257 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 SRRDQ9UH36 339 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 AKT3Q9Y243 479 aa11.39□□□□□ -0.59
LINC00173-203ENST00000480237 ANKRD63C9JTQ0 380 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 GPR25O00155 361 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 MFAP3LO75121 409 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 SKILP12757 684 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 ELNP15502 786 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 CASP14P31944 242 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 EFNA5P52803 228 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 CAP1Q01518 475 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 CDCA2Q69YH5 1023 aaPredicted RBP11.38□□□□□ -0.59
LINC00173-203ENST00000480237 TC2NQ8N9U0 490 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 NEK11Q8NG66 645 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 RAET1EQ8TD07 263 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 MAP7D2Q96T17 732 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 TMEM134Q9H6X4 195 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 SPC25Q9HBM1 224 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 PYCARDQ9ULZ3 195 aa11.38□□□□□ -0.59
LINC00173-203ENST00000480237 RRN3P2A6NIE6 340 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 ASAP2O43150 1006 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SEPT4O43236 478 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 HMGCRP04035 888 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 PRKCBP05771 671 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 GJB1P08034 283 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SMIM10L2AP0DMW4 78 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SMIM10L2BP0DMW5 78 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 RARBP10826 455 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 GARTP22102 1010 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 PHKA2P46019 1235 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 KLK7P49862 253 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 CACNB2Q08289 660 aaPredicted RBP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 BFSP1Q12934 665 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 TRIM32Q13049 653 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 ARHGEF6Q15052 776 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 TMEM132AQ24JP5 1023 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SLC39A4Q6P5W5 647 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 MTHFD1LQ6UB35 978 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 INTS8Q75QN2 995 aaKnown RBP11.37□□□□□ -0.59
LINC00173-203ENST00000480237 RDH13Q8NBN7 331 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 LMBR1Q8WVP7 490 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 KCNN1Q92952 543 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 IQCDQ96DY2 449 aa11.37□□□□□ -0.59
LINC00173-203ENST00000480237 SAAL1Q96ER3 474 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms