RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 LIG4P49917 911 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 PAK2Q13177 524 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 GPNMBQ14956 572 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 PLEKHG4Q58EX7 1191 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 ATF7IP2Q5U623 682 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 SLFN12LQ6IEE8 588 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 TTI2Q6NXR4 508 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 NOTUMQ6P988 496 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 SLC9A9Q8IVB4 645 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 SYCP3Q8IZU3 236 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 NELFBQ8WX92 580 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 APBB2Q92870 758 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 BICD1Q96G01 975 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 TSG101Q99816 390 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 TARS2Q9BW92 718 aaKnown RBP13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 TRAIPQ9BWF2 469 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 PPP1R12CQ9BZL4 782 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 TSPY26PQ9H489 355 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 PDZD7Q9H5P4 517 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 AGPAT3Q9NRZ7 376 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 PADI3Q9ULW8 664 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 ST3GAL5Q9UNP4 418 aa13.74□□□□□ -0.21
TRAPPC12-218ENST00000479897 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 IKBKBO14920 756 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 CALUO43852 315 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 FGFR4P22455 802 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 ADSSP30520 456 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 CD52P31358 61 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 CYP2C18P33260 490 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 PMS1P54277 932 aaKnown RBP13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 MCL1Q07820 350 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 NCBP1Q09161 790 aaKnown RBP13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 DSC3Q14574 896 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 KLHL10Q6JEL2 608 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 MFSD5Q6N075 450 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 MPZL3Q6UWV2 235 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 ENOX1Q8TC92 643 aaKnown RBP13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 MED15Q96RN5 788 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 FTHL17Q9BXU8 183 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 IFIH1Q9BYX4 1025 aaKnown RBP13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 OSBPL7Q9BZF2 842 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 PRDM5Q9NQX1 630 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 CITO14578 2027 aa13.73□□□□□ -0.21
TRAPPC12-218ENST00000479897 ANK1P16157 1881 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 A0A0B4J269 797 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 TRIM49BA6NDI0 452 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 ANKRD63C9JTQ0 380 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 PFKMP08237 780 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 MCF2P10911 925 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 RAG1P15918 1043 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 ITGB8P26012 769 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 ZNF165P49910 485 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 HSP90AA2PQ14568 343 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 NOLC1Q14978 699 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 DCAF4L1Q3SXM0 396 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 SLC27A1Q6PCB7 646 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 LRRC55Q6ZSA7 311 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 APBB1IPQ7Z5R6 666 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 FAM200AQ8TCP9 573 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 SCLYQ96I15 445 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 FBXL18Q96ME1 805 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 DUSP9Q99956 384 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 ADPGKQ9BRR6 497 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 CDT1Q9H211 546 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 IKZF4Q9H2S9 585 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 DMAC2Q9NW81 257 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 PRKAG2Q9UGJ0 569 aa13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 PIN4Q9Y237 131 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 PDCD11Q14690 1871 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-218ENST00000479897 TISP43B9A030 160 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 MAPK13O15264 365 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 CLDN3O15551 220 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 FAM189A1O60320 539 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 EVI5O60447 810 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 NR3C1P04150 777 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 NR2F2P24468 414 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 RPL13P26373 211 aaKnown RBP13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 RAB27AP51159 221 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 CCL23P55773 120 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 FKBP3Q00688 224 aaKnown RBP13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 POU5F1Q01860 360 aaKnown RBP13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 MYL5Q02045 173 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 IQCB1Q15051 598 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 ZNF568Q3ZCX4 644 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 EEF1DP3Q658K8 133 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 ANKRD40Q6AI12 368 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 ARMCX5Q6P1M9 558 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 C7orf61Q8IZ16 206 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 TMEM199Q8N511 208 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 SEPT8Q92599 483 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 VWCEQ96DN2 955 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 CEP63Q96MT8 703 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 CBWD1Q9BRT8 395 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 MKNK1Q9BUB5 465 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 HAPLN2Q9GZV7 340 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 TMX1Q9H3N1 280 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 ANKFY1Q9P2R3 1169 aa13.71□□□□□ -0.21
TRAPPC12-218ENST00000479897 TTC3P53804 2025 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms