RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CYP4X1Q8N118 509 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 SAAL1Q96ER3 474 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 NYXQ9GZU5 481 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.24■■□□□ 1.15
COL13A1-208ENST00000479733 KLHL14Q9P2G3 628 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 NKX1-2Q9UD57 310 aaPredicted RBP22.24■■□□□ 1.15
COL13A1-208ENST00000479733 RABGAP1Q9Y3P9 1069 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 DDX60LQ5H9U9 1706 aaKnown RBP22.24■■□□□ 1.15
COL13A1-208ENST00000479733 ABL2P42684 1182 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 IRX1P78414 480 aaPredicted RBP22.24■■□□□ 1.15
COL13A1-208ENST00000479733 RRP1BQ14684 758 aaKnown RBP22.24■■□□□ 1.15
COL13A1-208ENST00000479733 RHOT2Q8IXI1 618 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 PASKQ96RG2 1323 aa22.24■■□□□ 1.15
COL13A1-208ENST00000479733 CHMP2AO43633 222 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 MYL7Q01449 175 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 USH1GQ495M9 461 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 MFSD5Q6N075 450 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 NSMFQ6X4W1 530 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 RPUSD2Q8IZ73 545 aaKnown RBP22.23■■□□□ 1.15
COL13A1-208ENST00000479733 ETNPPLQ8TBG4 499 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 RUNDC3BQ96NL0 473 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 TMEM237Q96Q45 408 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 MTUS1Q9ULD2 1270 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 FAM86B1E9PN63 330 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 FAM86B2P0C5J1 330 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 NOVP48745 357 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 CGB2Q6NT52 195 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 CKAP2Q8WWK9 683 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 CD209Q9NNX6 404 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 AAASQ9NRG9 546 aa22.23■■□□□ 1.15
COL13A1-208ENST00000479733 ATAD5Q96QE3 1844 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 MIF4GDA9UHW6 222 aaKnown RBP22.22■■□□□ 1.15
COL13A1-208ENST00000479733 CLDN3O15551 220 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 ECEL1O95672 775 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 PEX5P50542 639 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 ASRGL1Q7L266 308 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 SLC13A5Q86YT5 568 aaPredicted RBP22.22■■□□□ 1.15
COL13A1-208ENST00000479733 TPH2Q8IWU9 490 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 ZMYND8Q9ULU4 1186 aaPredicted RBP22.22■■□□□ 1.15
COL13A1-208ENST00000479733 FRMD4BQ9Y2L6 1034 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 NAV1Q8NEY1 1877 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 ROBO1Q9Y6N7 1651 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 ATP8B3O60423 1300 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 EML1O00423 815 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 GJB6O95452 261 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 RNF207Q6ZRF8 634 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 ECHDC2Q86YB7 292 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 ATG4AQ8WYN0 398 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 LAMB2P55268 1798 aa22.22■■□□□ 1.15
COL13A1-208ENST00000479733 ZMYM2Q9UBW7 1377 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 GPC5P78333 572 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 RINT1Q6NUQ1 792 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 ZBTB10Q96DT7 871 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 ROPN1BQ9BZX4 212 aaPredicted RBP22.21■■□□□ 1.15
COL13A1-208ENST00000479733 TRIM7Q9C029 511 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 DNAJC18Q9H819 358 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 ROPN1Q9HAT0 212 aaPredicted RBP22.21■■□□□ 1.15
COL13A1-208ENST00000479733 HSPA6P17066 643 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 KRT17Q04695 432 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 BMT2Q1RMZ1 405 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 MIGA2Q7L4E1 593 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 ANKLE1Q8NAG6 615 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 DOT1LQ8TEK3 1739 aa22.21■■□□□ 1.15
COL13A1-208ENST00000479733 H0Y3Z8 333 aa22.2■■□□□ 1.15
COL13A1-208ENST00000479733 UFL1O94874 794 aa22.2■■□□□ 1.15
COL13A1-208ENST00000479733 GBP1P32455 592 aa22.2■■□□□ 1.15
COL13A1-208ENST00000479733 CDCA2Q69YH5 1023 aaPredicted RBP22.2■■□□□ 1.15
COL13A1-208ENST00000479733 VSIG1Q86XK7 387 aa22.2■■□□□ 1.15
COL13A1-208ENST00000479733 KAT5Q92993 513 aa22.2■■□□□ 1.15
COL13A1-208ENST00000479733 UTP4Q969X6 686 aaKnown RBP22.2■■□□□ 1.15
COL13A1-208ENST00000479733 THAP12O43422 761 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 EXOC3O60645 756 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 HIP1RO75146 1068 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 TARSP26639 723 aaKnown RBP22.2■■□□□ 1.14
COL13A1-208ENST00000479733 DLG4P78352 724 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 CLUL1Q15846 466 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 PRUNE1Q86TP1 453 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 NAF1Q96HR8 494 aaKnown RBP22.2■■□□□ 1.14
COL13A1-208ENST00000479733 NAP1L4Q99733 375 aaKnown RBP22.2■■□□□ 1.14
COL13A1-208ENST00000479733 EIF2AK1Q9BQI3 630 aaKnown RBP22.2■■□□□ 1.14
COL13A1-208ENST00000479733 OSBPL1AQ9BXW6 950 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 PITPNM3Q9BZ71 974 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 PCIF1Q9H4Z3 704 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 SPATS2LQ9NUQ6 558 aaKnown RBP22.2■■□□□ 1.14
COL13A1-208ENST00000479733 ALAS1P13196 640 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 HOXA13P31271 388 aaPredicted RBP22.2■■□□□ 1.14
COL13A1-208ENST00000479733 SHROOM1Q2M3G4 852 aaPredicted RBP22.2■■□□□ 1.14
COL13A1-208ENST00000479733 TRMT10CQ7L0Y3 403 aaKnown RBP22.2■■□□□ 1.14
COL13A1-208ENST00000479733 ARHGEF19Q8IW93 802 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 PARD3BQ8TEW8 1205 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 CNKSR1Q969H4 720 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 PRKAG3Q9UGI9 489 aa22.2■■□□□ 1.14
COL13A1-208ENST00000479733 MEIS2O14770 477 aa22.19■■□□□ 1.14
COL13A1-208ENST00000479733 PDHA1P08559 390 aa22.19■■□□□ 1.14
COL13A1-208ENST00000479733 CETPP11597 493 aa22.19■■□□□ 1.14
COL13A1-208ENST00000479733 SARNPP82979 210 aaKnown RBP22.19■■□□□ 1.14
COL13A1-208ENST00000479733 BIRC2Q13490 618 aa22.19■■□□□ 1.14
COL13A1-208ENST00000479733 THEMIS2Q5TEJ8 643 aa22.19■■□□□ 1.14
COL13A1-208ENST00000479733 HS2ST1Q7LGA3 356 aa22.19■■□□□ 1.14
COL13A1-208ENST00000479733 SPDYE1Q8NFV5 336 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms