RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 MXD4Q14582 209 aaPredicted RBP19.31■□□□□ 0.68
ECHDC1-216ENST00000479525 CBX2Q14781 532 aaPredicted RBP19.31■□□□□ 0.68
ECHDC1-216ENST00000479525 TAS1R1Q7RTX1 841 aa19.31■□□□□ 0.68
ECHDC1-216ENST00000479525 FAM122AQ96E09 287 aa19.31■□□□□ 0.68
ECHDC1-216ENST00000479525 POMKQ9H5K3 350 aa19.31■□□□□ 0.68
ECHDC1-216ENST00000479525 DENND4AQ7Z401 1863 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 EDN1P05305 212 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 CTSAP10619 480 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 PLA2G5P39877 138 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 OR1G1P47890 313 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 NOTUMQ6P988 496 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 TMEM184AQ6ZMB5 413 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 DDX53Q86TM3 631 aaKnown RBP19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 TMEM87AQ8NBN3 555 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 FBXO18Q8NFZ0 1043 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 CASP10Q92851 521 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 B3GALT6Q96L58 329 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 KIFC3Q9BVG8 833 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 CSRNP2Q9H175 543 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 CXCL16Q9H2A7 254 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 MARCH5Q9NX47 278 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 FAN1Q9Y2M0 1017 aa19.3■□□□□ 0.68
ECHDC1-216ENST00000479525 ARL5CA6NH57 179 aa19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 PP2D1A8MPX8 630 aa19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 CD2BP2O95400 341 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 SRGAP2BP0DMP2 458 aa19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 PTPN14Q15678 1187 aa19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 HERC4Q5GLZ8 1057 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 LLPHQ9BRT6 129 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 TRIM6Q9C030 488 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 FOXP1Q9H334 677 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 PCDHB6Q9Y5E3 794 aa19.29■□□□□ 0.68
ECHDC1-216ENST00000479525 MYH11P35749 1972 aa19.28■□□□□ 0.68
ECHDC1-216ENST00000479525 NOSTRINQ8IVI9 506 aa19.28■□□□□ 0.68
ECHDC1-216ENST00000479525 ZSCAN31Q96LW9 406 aaPredicted RBP19.28■□□□□ 0.68
ECHDC1-216ENST00000479525 SMOC2Q9H3U7 446 aa19.28■□□□□ 0.68
ECHDC1-216ENST00000479525 TUFT1Q9NNX1 390 aa19.28■□□□□ 0.68
ECHDC1-216ENST00000479525 KMT2EQ8IZD2 1858 aa19.28■□□□□ 0.68
ECHDC1-216ENST00000479525 CNTNAP2Q9UHC6 1331 aa19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 ARHGEF35A5YM69 484 aa19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 CDC25AP30304 524 aa19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 CCT6AP40227 531 aaKnown RBP19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 TOB1P50616 345 aaPredicted RBP19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 HMGN5P82970 282 aaKnown RBP19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 PADI6Q6TGC4 694 aa19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 TMC5Q6UXY8 1006 aa19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 IFNLR1Q8IU57 520 aaPredicted RBP19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 GLYCTKQ8IVS8 523 aa19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 COLGALT2Q8IYK4 626 aa19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 C4orf32Q8N8J7 132 aa19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 PARP2Q9UGN5 583 aa19.27■□□□□ 0.68
ECHDC1-216ENST00000479525 C2CD4DB7Z1M9 353 aa19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 EIF5BO60841 1220 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 ALDH2P05091 517 aa19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 CNPP09543 421 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 TMEM132AQ24JP5 1023 aa19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 SLC22A17Q8WUG5 538 aa19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 EDAQ92838 391 aa19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 KLHL5Q96PQ7 755 aa19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 POLR3CQ9BUI4 534 aaPredicted RBP19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 SH2B1Q9NRF2 756 aaPredicted RBP19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 DOCK6Q96HP0 2047 aa19.26■□□□□ 0.67
ECHDC1-216ENST00000479525 MTCL1Q9Y4B5 1905 aaKnown RBP19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 SPDYE4A6NLX3 237 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 KLRC2P26717 231 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 RPA1P27694 616 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 AXLP30530 894 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 RBM25P49756 843 aaKnown RBP19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 ZXDAP98168 799 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 MCTP1Q6DN14 999 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 HASPINQ8TF76 798 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 NACC1Q96RE7 527 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 PAAF1Q9BRP4 392 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 BHMT2Q9H2M3 363 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 DBR1Q9UK59 544 aaKnown RBP19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 ZNF318Q5VUA4 2279 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 VWA8A3KMH1 1905 aa19.25■□□□□ 0.67
ECHDC1-216ENST00000479525 FSD2A1L4K1 749 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 TMEM221A6NGB7 291 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 M0R296 226 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 ASGR2P07307 311 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 SPATA31D3P0C874 917 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 HOXB8P17481 243 aaPredicted RBP19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 NCBP1Q09161 790 aaKnown RBP19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 PTGDRQ13258 359 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 BMS1Q14692 1282 aaKnown RBP19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 IL17AQ16552 155 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 TPRNQ4KMQ1 711 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 EEF1DP3Q658K8 133 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 CES5AQ6NT32 575 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 SLC27A1Q6PCB7 646 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 SPATA31D4Q6ZUB0 917 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 ZBTB33Q86T24 672 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 GSTCDQ8NEC7 633 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 ERMNQ8TAM6 284 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 TMEM175Q9BSA9 504 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 ADAM7Q9H2U9 754 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 PDZD7Q9H5P4 517 aa19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 DDX19AQ9NUU7 478 aaKnown RBP19.24■□□□□ 0.67
ECHDC1-216ENST00000479525 SNTG2Q9NY99 539 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms