RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 WASF3Q9UPY6 502 aa8.86□□□□□ -0.99
GAPVD1-217ENST00000479511 PCDHA3Q9Y5H8 950 aa8.86□□□□□ -0.99
GAPVD1-217ENST00000479511 PHGDHO43175 533 aaKnown RBP8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 FGF18O76093 207 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 KITP10721 976 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 MAN1A1P33908 653 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 TECP42680 631 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 MAPK9P45984 424 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 GPR15P49685 360 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 HK2P52789 917 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 PUM3Q15397 648 aaKnown RBP8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 THEMIS2Q5TEJ8 643 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 JAKMIP3Q5VZ66 844 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 ALYREFQ86V81 257 aaKnown RBP8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 SESTD1Q86VW0 696 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 TBC1D20Q96BZ9 403 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 SLC35A4Q96G79 324 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 ALPK1Q96QP1 1244 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 TTLL2Q9BWV7 592 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 RBM12Q9NTZ6 932 aaKnown RBP8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 LMCD1Q9NZU5 365 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 PIM2Q9P1W9 311 aa8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.85□□□□□ -0.99
GAPVD1-217ENST00000479511 MAGI1Q96QZ7 1491 aaPredicted RBP8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 PRR19A6NJB7 356 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 H3BUI4 141 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 MYO1FO00160 1098 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 ADAMTS3O15072 1205 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 PSPNO60542 156 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 DBHP09172 617 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 FOSL1P15407 271 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 HOXA10P31260 410 aaPredicted RBP8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 GEMIN4P57678 1058 aaKnown RBP8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 FMO1Q01740 532 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 KLHDC7AQ5VTJ3 777 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 PPP4R3AQ6IN85 833 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 HEATR3Q7Z4Q2 680 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 PROSER1Q86XN7 944 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 RHOT1Q8IXI2 618 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 CELF5Q8N6W0 485 aaKnown RBP8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 OR10H5Q8NGA6 315 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 CALML6Q8TD86 181 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 GCC1Q96CN9 775 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 TMEM41AQ96HV5 264 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 SAMD11Q96NU1 681 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 C7orf25Q9BPX7 421 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 ZNF287Q9HBT7 754 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 INCENPQ9NQS7 918 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 LMBRD1Q9NUN5 540 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 BCCIPQ9P287 314 aaKnown RBP eCLIP8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 TOP2AP11388 1531 aaKnown RBP8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 TOPBP1Q92547 1522 aa8.84□□□□□ -0.99
GAPVD1-217ENST00000479511 WDR97A6NE52 1622 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 A0A0A6YYK5 440 aaPredicted RBP8.83□□□□□ -1
GAPVD1-217ENST00000479511 DDX3XO00571 662 aaKnown RBP eCLIP8.83□□□□□ -1
GAPVD1-217ENST00000479511 SEC24DO94855 1032 aaPredicted RBP8.83□□□□□ -1
GAPVD1-217ENST00000479511 HARSP12081 509 aaKnown RBP8.83□□□□□ -1
GAPVD1-217ENST00000479511 HSD3B1P14060 373 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 RPL17P18621 184 aaKnown RBP8.83□□□□□ -1
GAPVD1-217ENST00000479511 FSTP19883 344 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 HSPA7P48741 367 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 GALK1P51570 392 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 CHRNEQ04844 493 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 ICA1Q05084 483 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 BLMHQ13867 455 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 TIGD5Q53EQ6 642 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 GGT6Q6P531 493 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 ZDHHC13Q8IUH4 622 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 SH2D3CQ8N5H7 860 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 CCDC33Q8N5R6 958 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 C3orf20Q8ND61 904 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 BRI3BPQ8WY22 251 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 HOXB13Q92826 284 aaPredicted RBP8.83□□□□□ -1
GAPVD1-217ENST00000479511 CLPTM1LQ96KA5 538 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 PPP1R16BQ96T49 567 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 SOX7Q9BT81 388 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 RRN3Q9NYV6 651 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 DTLQ9NZJ0 730 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 SCINQ9Y6U3 715 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 SNAPC4Q5SXM2 1469 aa8.83□□□□□ -1
GAPVD1-217ENST00000479511 DIP2BQ9P265 1576 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 MAPKBP1O60336 1514 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 ZNF839A8K0R7 811 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 TMEM127O75204 238 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 CSTBP04080 98 aaKnown RBP8.82□□□□□ -1
GAPVD1-217ENST00000479511 NPR1P16066 1061 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 PDIA3P30101 505 aaKnown RBP8.82□□□□□ -1
GAPVD1-217ENST00000479511 SLC7A1P30825 629 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 ZP2Q05996 745 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 TARDBPQ13148 414 aaKnown RBP eCLIP8.82□□□□□ -1
GAPVD1-217ENST00000479511 DAG1Q14118 895 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 CNGA2Q16280 664 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 MPEG1Q2M385 716 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 KHDC1Q4VXA5 237 aaKnown RBP8.82□□□□□ -1
GAPVD1-217ENST00000479511 PRR16Q569H4 304 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 CIAPIN1Q6FI81 312 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 TMC6Q7Z403 805 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 NLRX1Q86UT6 975 aa8.82□□□□□ -1
GAPVD1-217ENST00000479511 SYTL1Q8IYJ3 562 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms