RNA–Protein interactions for RNA: ENST00000479428.3

RN7SL546P-201, Transcript of RNA, 7SL, cytoplasmic 546, pseudogene, humanhuman

BASIC

Gene RN7SL546P, Length 290 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL546P-201ENST00000479428 ATF7IP2Q5U623 682 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 TWF2Q6IBS0 349 aaKnown RBP11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 SLC24A5Q71RS6 500 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 MAP4K3Q8IVH8 894 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 GLIS3Q8NEA6 775 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 ERCC4Q92889 916 aaPredicted RBP11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 CCDC47Q96A33 483 aaKnown RBP11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 HVCN1Q96D96 273 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 CCDC51Q96ER9 411 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 ACO2Q99798 780 aaKnown RBP11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 TRAIPQ9BWF2 469 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 PDZD7Q9H5P4 517 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 PCDHA5Q9Y5H7 936 aa11.86□□□□□ -0.51
RN7SL546P-201ENST00000479428 A0A0U1RQF3 1178 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 N4BP3O15049 544 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 SMC2O95347 1197 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 MBD3O95983 291 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 PIGRP01833 764 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 ATP2A2P16615 1042 aaKnown RBP11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 SARSP49591 514 aaKnown RBP11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 FAM189BP81408 668 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 KCNA1Q09470 495 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 STK4Q13043 487 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 PSMD2Q13200 908 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 CAMK4Q16566 473 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 L1TD1Q5T7N2 865 aaKnown RBP11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 SLC27A1Q6PCB7 646 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 ZPBP2Q6X784 338 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 STXBP4Q6ZWJ1 553 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 EPM2AIP1Q7L775 607 aaPredicted RBP11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 CDR2LQ86X02 465 aaPredicted RBP11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 MYOCDQ8IZQ8 938 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 PHOSPHO2Q8TCD6 241 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 SMARCE1Q969G3 411 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 TOP1MTQ969P6 601 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 GSDMAQ96QA5 445 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 ACCSQ96QU6 501 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 SLC9A7Q96T83 725 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 EIF2AQ9BY44 585 aaKnown RBP11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 SLC39A2Q9NP94 309 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 FAM105AQ9NUU6 356 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 TNFSF13BQ9Y275 285 aa11.85□□□□□ -0.51
RN7SL546P-201ENST00000479428 TTC3P53804 2025 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 HNRNPDLO14979 420 aaKnown RBP11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 EIF3DO15371 548 aaKnown RBP eCLIP11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 ZNF623O75123 536 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 PRPF6O94906 941 aaKnown RBP11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 SKIP12755 728 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 IBSPP21815 317 aaPredicted RBP11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 PROZP22891 400 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 LIG4P49917 911 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 RAB27AP51159 221 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 EEF1DP3Q658K8 133 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 TMCO2Q7Z6W1 182 aaPredicted RBP11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 ZNF598Q86UK7 904 aaKnown RBP11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 ECHDC2Q86YB7 292 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 NPAS4Q8IUM7 802 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 CRIPAKQ8N1N5 446 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 KIAA0895Q8NCT3 520 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 BICD1Q96G01 975 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 ADPGKQ9BRR6 497 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 NUP62CLQ9H1M0 184 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 ELAC1Q9H777 363 aaKnown RBP11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 PTPRHQ9HD43 1115 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 RMND1Q9NWS8 449 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 EXOC7Q9UPT5 735 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 PCDHB2Q9Y5E7 798 aa11.84□□□□□ -0.51
RN7SL546P-201ENST00000479428 CHD9Q3L8U1 2897 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 ABLIM1O14639 778 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 TOM1L1O75674 476 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 UPP2O95045 317 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 GJB5O95377 273 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 NPTXRO95502 500 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 EOMESO95936 686 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 STAG3L1P0CL83 205 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 ATF7P17544 494 aaPredicted RBP11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 HOXD13P35453 343 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 BMT2Q1RMZ1 405 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 DCAF4L1Q3SXM0 396 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 ZNF568Q3ZCX4 644 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 FAM117BQ6P1L5 589 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 SLC39A4Q6P5W5 647 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 MPZL3Q6UWV2 235 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 MRPL10Q7Z7H8 261 aaKnown RBP11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 HERC6Q8IVU3 1022 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 SYCP3Q8IZU3 236 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 SMG8Q8ND04 991 aaKnown RBP11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 SCFD1Q8WVM8 642 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 ZBTB45Q96K62 511 aaPredicted RBP11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 TCHPQ9BT92 498 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 TRIM6Q9C030 488 aaPredicted RBP11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 IKZF4Q9H2S9 585 aa11.83□□□□□ -0.52
RN7SL546P-201ENST00000479428 TMEM206Q9H813 350 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms