RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 KIFC3Q9BVG8 833 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 IDI2Q9BXS1 227 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 ZNF341Q9BYN7 854 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 WDR11Q9BZH6 1224 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 TRIM31Q9BZY9 425 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 RAVER2Q9HCJ3 691 aaKnown RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 PRM3Q9NNZ6 103 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 FANCFQ9NPI8 374 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 ZNF70Q9UC06 446 aaPredicted RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 GCOM1H8Y6P7 765 aaPredicted RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 POLR2MP0CAP2 368 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 HSD3B2P26439 372 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 GUCY2DQ02846 1103 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 ZNF746Q6NUN9 644 aaPredicted RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 NSMFQ6X4W1 530 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 PHLDB2Q86SQ0 1253 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 GLYCTKQ8IVS8 523 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 RSRC1Q96IZ7 334 aaKnown RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 EPAS1Q99814 870 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.55□□□□□ -1.369e-7■□□□□ 9.8
SH3D19-207ENST00000478503 NFU1Q9UMS0 254 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 AFG3L2Q9Y4W6 797 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 MYH7BA7E2Y1 1941 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 PLIN4Q96Q06 1357 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 COL24A1Q17RW2 1714 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 KLHL33A6NCF5 533 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 TMEM110-MUSTN1A8MSY1 372 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 CEP104O60308 925 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 PPFIA2O75334 1257 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 GLI1P08151 1106 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 PON1P27169 355 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 PAFAH1B1P43034 410 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 CARSP49589 748 aaKnown RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 FAM153CQ494X1 144 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 INO80DQ53TQ3 878 aaPredicted RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 DLK2Q6UY11 383 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 LDHDQ86WU2 507 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 ANKRD13BQ86YJ7 626 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 SYT2Q8N9I0 419 aaPredicted RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 MTMR14Q8NCE2 650 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 EPB41L5Q9HCM4 733 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 CEP72Q9P209 647 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 FAM153AQ9UHL3 310 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 VAV3Q9UKW4 847 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 DLEC1Q9Y238 1755 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 DNAH12Q6ZR08 3092 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 A0A1W2PQJ5 194 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 AFPP02771 609 aaKnown RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 SREBF1P36956 1147 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 C8orf74Q6P047 294 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 FAM178BQ8IXR5 827 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 SH2D3CQ8N5H7 860 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 SLC43A3Q8NBI5 491 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 FBXO41Q8TF61 875 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 ARNT2Q9HBZ2 717 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 COL20A1Q9P218 1284 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 CCPG1Q9ULG6 757 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 ASTN1O14525 1302 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 H0YC42 278 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 SERPING1P05155 500 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 DPEP1P16444 411 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 STIP1P31948 543 aaKnown RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 RDXP35241 583 aaKnown RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 PPP1R2P41236 205 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 ATP1A2P50993 1020 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 NPEPPSP55786 919 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 DLG4P78352 724 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 CKAP4Q07065 602 aaKnown RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 HLTFQ14527 1009 aaKnown RBP eCLIP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 ZSCAN26Q16670 478 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 CBWD6Q4V339 395 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 CBWD3Q5JTY5 395 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 CBWD5Q5RIA9 395 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 ALKBH5Q6P6C2 394 aaKnown RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 C1orf228Q6PIY5 440 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 CCNI2Q6ZMN8 369 aaPredicted RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 OTOP1Q7RTM1 612 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 DAAM2Q86T65 1068 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 PALB2Q86YC2 1186 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 TSEN2Q8NCE0 465 aaKnown RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 TRIM63Q969Q1 353 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 CCDC127Q96BQ5 260 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 LXNQ9BS40 222 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 TINF2Q9BSI4 451 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 OSGEPQ9NPF4 335 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 TELO2Q9Y4R8 837 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 POTEB2H3BUK9 544 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 TGFB1I1O43294 461 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 PIP5K1CO60331 668 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 EXOC3O60645 756 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 ZBTB7AO95365 584 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 KRT14P02533 472 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 EPB41P11171 864 aaKnown RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 ASTE1Q2TB18 679 aaPredicted RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 EAPPQ56P03 285 aaPredicted RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 FIGNQ5HY92 759 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 SAMD7Q7Z3H4 446 aa6.54□□□□□ -1.36
SH3D19-207ENST00000478503 DNAJB7Q7Z6W7 309 aaPredicted RBP6.54□□□□□ -1.36
SH3D19-207ENST00000478503 FAM186BQ8IYM0 893 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms