RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 SRGAP1Q7Z6B7 1085 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 C4orf32Q8N8J7 132 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 DDX12PQ92771 950 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 PABPC5Q96DU9 382 aaKnown RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 NACC1Q96RE7 527 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 PLIN2Q99541 437 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 TCF25Q9BQ70 676 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 POLR3CQ9BUI4 534 aaPredicted RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 KIFC3Q9BVG8 833 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 EIF2AQ9BY44 585 aaKnown RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 MRPL9Q9BYD2 267 aaKnown RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 BHMT2Q9H2M3 363 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 TLR9Q9NR96 1032 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 DDX19AQ9NUU7 478 aaKnown RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 USP20Q9Y2K6 914 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 HES2Q9Y543 173 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 PLXNA4Q9HCM2 1894 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 BDP1A6H8Y1 2624 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 VWA3AA6NCI4 1184 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 E9PMD0 336 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 ASAP2O43150 1006 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 TBX10O75333 385 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 NPTXRO95502 500 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 EOMESO95936 686 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 POMCP01189 267 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 SSBP05455 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 SKIP12755 728 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 RPA1P27694 616 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 HOXA11P31270 313 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 SSTR3P32745 418 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 ARL2P36404 184 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 RAB27AP51159 221 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 AFF1P51825 1210 aaKnown RBP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 BCAR1P56945 870 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 PTENP60484 403 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 ERVFC1P60507 584 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 RAD51AP2Q09MP3 1159 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 MYO7AQ13402 2215 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 IL17AQ16552 155 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 LEXMQ3ZCV2 418 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 NAALADL2Q58DX5 795 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 NOMO2Q5JPE7 1267 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 UBXN11Q5T124 520 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 NOTUMQ6P988 496 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 DTHD1Q6ZMT9 781 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 TMEM173Q86WV6 379 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 MCPH1Q8NEM0 835 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 URGCPQ8TCY9 931 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 BSNDQ8WZ55 320 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 PPP2R3CQ969Q6 453 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 PGBD4Q96DM1 585 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 APOL5Q9BWW9 433 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 BACH2Q9BYV9 841 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 RAB34Q9BZG1 259 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 TRIM6Q9C030 488 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 TLE6Q9H808 572 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 RSAD1Q9HA92 442 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 BRWD1Q9NSI6 2320 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 TBC1D13Q9NVG8 400 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 DBR1Q9UK59 544 aaKnown RBP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 BARX2Q9UMQ3 279 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-205ENST00000477893 GTF3C3Q9Y5Q9 886 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 MUC3AQ02505 3323 aa9.18□□□□□ -0.94
ERCC8-205ENST00000477893 HIDE1A8MVS5 230 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 B4GALT3O60512 393 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 RNF40O75150 1001 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 OFD1O75665 1012 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 ITGA4P13612 1032 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 ARF4P18085 180 aaPredicted RBP9.17□□□□□ -0.94
ERCC8-205ENST00000477893 AKAP5P24588 427 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 PPM1AP35813 382 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 MLH1P40692 756 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 ALDH7A1P49419 539 aaKnown RBP9.17□□□□□ -0.94
ERCC8-205ENST00000477893 KRT17Q04695 432 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 NCBP1Q09161 790 aaKnown RBP9.17□□□□□ -0.94
ERCC8-205ENST00000477893 CSPP1Q1MSJ5 1256 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 RILPL1Q5EBL4 403 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 KRT79Q5XKE5 535 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 AGMOQ6ZNB7 445 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 TMC7Q7Z402 723 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 ZNF280BQ86YH2 543 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 ZBTB8OSQ8IWT0 167 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 SLC39A11Q8N1S5 342 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 SMG8Q8ND04 991 aaKnown RBP9.17□□□□□ -0.94
ERCC8-205ENST00000477893 DEPTORQ8TB45 409 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 BCL7CQ8WUZ0 217 aaPredicted RBP9.17□□□□□ -0.94
ERCC8-205ENST00000477893 AUTS2Q8WXX7 1259 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 MRPS27Q92552 414 aaKnown RBP9.17□□□□□ -0.94
ERCC8-205ENST00000477893 NXF3Q9H4D5 531 aaKnown RBP9.17□□□□□ -0.94
ERCC8-205ENST00000477893 SPG21Q9NZD8 308 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 KLK14Q9P0G3 267 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 DNAJB4Q9UDY4 337 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 PUF60Q9UHX1 559 aaKnown RBP9.17□□□□□ -0.94
ERCC8-205ENST00000477893 PRG3Q9Y2Y8 225 aaPredicted RBP9.17□□□□□ -0.94
ERCC8-205ENST00000477893 IPPQ9Y573 584 aa9.17□□□□□ -0.94
ERCC8-205ENST00000477893 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms