RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 NFE2L3Q9Y4A8 694 aa18.49■□□□□ 0.55
EPHB4-204ENST00000477446 H0YCG3 227 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 H0YGN5 161 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 ACRP10323 421 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 KCNJ6P48051 423 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 CASP5P51878 434 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 PPIGQ13427 754 aaKnown RBP eCLIP18.48■□□□□ 0.553e-8■□□□□ 8.9
EPHB4-204ENST00000477446 KCNB1Q14721 858 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 MAPK6Q16659 721 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 AMHR2Q16671 573 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 TCTN1Q2MV58 587 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 ZC2HC1CQ53FD0 456 aaPredicted RBP18.48■□□□□ 0.55
EPHB4-204ENST00000477446 FAM26FQ5R3K3 315 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 C16orf59Q7L2K0 433 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 CATSPER4Q7RTX7 472 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 TMC6Q7Z403 805 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 SLC17A8Q8NDX2 589 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 ST6GALNAC4Q9H4F1 302 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 IL23AQ9NPF7 189 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 R3HCC1Q9Y3T6 440 aaKnown RBP18.48■□□□□ 0.55
EPHB4-204ENST00000477446 PHLPP2Q6ZVD8 1323 aa18.48■□□□□ 0.55
EPHB4-204ENST00000477446 ERLIN2O94905 339 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 RHOBTB3O94955 611 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 GCNT3O95395 438 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 PRKCBP05771 671 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 MYBP10242 640 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 EPHB4P54760 987 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 GTF2BQ00403 316 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 LRMPQ12912 555 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 PCBP1Q15365 356 aaKnown RBP eCLIP18.47■□□□□ 0.551e-10■■■■■ 32.8
EPHB4-204ENST00000477446 FAM187BQ17R55 369 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 GLIS3Q8NEA6 775 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 SEPT8Q92599 483 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 KCNN1Q92952 543 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 CCDC47Q96A33 483 aaKnown RBP18.47■□□□□ 0.55
EPHB4-204ENST00000477446 STRA6Q9BX79 667 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 TMX1Q9H3N1 280 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 SLC39A2Q9NP94 309 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 PRMT7Q9NVM4 692 aaPredicted RBP18.47■□□□□ 0.55
EPHB4-204ENST00000477446 B4GALT5O43286 388 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 TSPAN1O60635 241 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 PPP1R37O75864 691 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 EDN1P05305 212 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 PFKMP08237 780 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 SKILP12757 684 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 ATP1A3P13637 1013 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 SCP2P22307 547 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 MAGEA10P43363 369 aaPredicted RBP18.47■□□□□ 0.55
EPHB4-204ENST00000477446 STK4Q13043 487 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 PSMD2Q13200 908 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 ZNF658Q5TYW1 1059 aaPredicted RBP18.47■□□□□ 0.55
EPHB4-204ENST00000477446 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 VSTM4Q8IW00 320 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 TBX20Q9UMR3 447 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 USP20Q9Y2K6 914 aa18.47■□□□□ 0.55
EPHB4-204ENST00000477446 TTLL13PA6NNM8 815 aa18.46■□□□□ 0.55
EPHB4-204ENST00000477446 PPP1R3GB7ZBB8 358 aa18.46■□□□□ 0.55
EPHB4-204ENST00000477446 ACKR2O00590 384 aa18.46■□□□□ 0.55
EPHB4-204ENST00000477446 HOXA11P31270 313 aaPredicted RBP18.46■□□□□ 0.55
EPHB4-204ENST00000477446 STRN3Q13033 797 aa18.46■□□□□ 0.55
EPHB4-204ENST00000477446 CNKSR3Q6P9H4 555 aa18.46■□□□□ 0.55
EPHB4-204ENST00000477446 CCDC112Q8NEF3 446 aa18.46■□□□□ 0.55
EPHB4-204ENST00000477446 APBB2Q92870 758 aa18.46■□□□□ 0.55
EPHB4-204ENST00000477446 AGPAT5Q9NUQ2 364 aa18.46■□□□□ 0.55
EPHB4-204ENST00000477446 PCDHB13Q9Y5F0 798 aa18.46■□□□□ 0.55
EPHB4-204ENST00000477446 PDE4DIPQ5VU43 2346 aa18.45■□□□□ 0.54
EPHB4-204ENST00000477446 CEP290O15078 2479 aa18.45■□□□□ 0.54
EPHB4-204ENST00000477446 ARF4P18085 180 aaPredicted RBP18.45■□□□□ 0.54
EPHB4-204ENST00000477446 ABCD1P33897 745 aa18.45■□□□□ 0.54
EPHB4-204ENST00000477446 PPP1R2P41236 205 aa18.45■□□□□ 0.54
EPHB4-204ENST00000477446 KCNA1Q09470 495 aa18.45■□□□□ 0.54
EPHB4-204ENST00000477446 PRPF4BQ13523 1007 aaKnown RBP18.45■□□□□ 0.54
EPHB4-204ENST00000477446 ALCAMQ13740 583 aa18.45■□□□□ 0.54
EPHB4-204ENST00000477446 ZNF365Q70YC5 407 aa18.45■□□□□ 0.54
EPHB4-204ENST00000477446 EPM2AIP1Q7L775 607 aaPredicted RBP18.45■□□□□ 0.54
EPHB4-204ENST00000477446 KIAA0895Q8NCT3 520 aa18.45■□□□□ 0.54
EPHB4-204ENST00000477446 CPB2Q96IY4 423 aa18.45■□□□□ 0.54
EPHB4-204ENST00000477446 PIN4Q9Y237 131 aaKnown RBP18.45■□□□□ 0.54
EPHB4-204ENST00000477446 MGEA5O60502 916 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 PRPF6O94906 941 aaKnown RBP18.44■□□□□ 0.54
EPHB4-204ENST00000477446 AXLP30530 894 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 CCZ1BP86790 482 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 CCZ1P86791 482 aaPredicted RBP18.44■□□□□ 0.54
EPHB4-204ENST00000477446 NCBP1Q09161 790 aaKnown RBP18.44■□□□□ 0.54
EPHB4-204ENST00000477446 TMEM240Q5SV17 173 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 STXBP4Q6ZWJ1 553 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 RTN4RL1Q86UN2 441 aaPredicted RBP18.44■□□□□ 0.54
EPHB4-204ENST00000477446 HVCN1Q96D96 273 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.44■□□□□ 0.542e-8■■■■□ 25.6
EPHB4-204ENST00000477446 FTHL17Q9BXU8 183 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 CHST12Q9NRB3 414 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 RWDD2AQ9UIY3 292 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 GDAQ9Y2T3 454 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 CNTNAP2Q9UHC6 1331 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 MICAL3Q7RTP6 2002 aa18.44■□□□□ 0.54
EPHB4-204ENST00000477446 EIF3DO15371 548 aaKnown RBP eCLIP18.43■□□□□ 0.54
EPHB4-204ENST00000477446 FGBP02675 491 aa18.43■□□□□ 0.54
EPHB4-204ENST00000477446 SPAG1Q07617 926 aa18.43■□□□□ 0.54
EPHB4-204ENST00000477446 IKBKEQ14164 716 aa18.43■□□□□ 0.54
EPHB4-204ENST00000477446 DSC3Q14574 896 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms