RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 NCKAP1LP55160 1127 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 KRT85P78386 507 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 AXDND1Q5T1B0 1012 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 SV2BQ7L1I2 683 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 SPRED2Q7Z698 418 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 COLGALT1Q8NBJ5 622 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 TMEM161BQ8NDZ6 487 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 HELQQ8TDG4 1101 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 GDPD5Q8WTR4 605 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 HVCN1Q96D96 273 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 CLIC6Q96NY7 704 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 TMEM175Q9BSA9 504 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 MRPL4Q9BYD3 311 aaKnown RBP13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 SCAND2PQ9GZW5 306 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 TNMDQ9H2S6 317 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 PDZD7Q9H5P4 517 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 PTPRHQ9HD43 1115 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 TFIP11Q9UBB9 837 aaKnown RBP13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 PUF60Q9UHX1 559 aaKnown RBP13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 MTUS1Q9ULD2 1270 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 B4GALT5O43286 388 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 TBCAO75347 108 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 TOM1L1O75674 476 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 ITGB1P05556 798 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 GAP43P17677 238 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 STAT6P42226 847 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 AMPD3Q01432 767 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 KRT17Q04695 432 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 STRN3Q13033 797 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 ALCAMQ13740 583 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 GIT2Q14161 759 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 KYAT1Q16773 422 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 PAN2Q504Q3 1202 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 ATF7IP2Q5U623 682 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 KCNT2Q6UVM3 1135 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 LRRC55Q6ZSA7 311 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 USP49Q70CQ1 688 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 IQUBQ8NA54 791 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 KLHL23Q8NBE8 558 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 RNF169Q8NCN4 708 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 SPPL3Q8TCT6 385 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 ATXN2LQ8WWM7 1075 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 ACO2Q99798 780 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 REEP2Q9BRK0 252 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 NSUN3Q9H649 340 aaKnown RBP13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 TBC1D13Q9NVG8 400 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 SPG21Q9NZD8 308 aa13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 FNDC1Q4ZHG4 1894 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-205ENST00000477360 PRRC2BQ5JSZ5 2229 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 FRMD3A2A2Y4 597 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 RFXAPO00287 272 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 FGF18O76093 207 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 FAM13AO94988 1023 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 PIGRP01833 764 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 KRT18P05783 430 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 MCF2P10911 925 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 PROZP22891 400 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 ME1P48163 572 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 GATMP50440 423 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 POU5F1Q01860 360 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 DNM1Q05193 864 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 DSC1Q08554 894 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 MCM6Q14566 821 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 BMS1Q14692 1282 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 E2F4Q16254 413 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 AAK1Q2M2I8 961 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 NT5DC1Q5TFE4 455 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 ADALQ6DHV7 355 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 CLEC17AQ6ZS10 378 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 GPR65Q8IYL9 337 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 SLC39A11Q8N1S5 342 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 LRRC15Q8TF66 581 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 CPB2Q96IY4 423 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 PLIN2Q99541 437 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 NGRNQ9NPE2 291 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 OLFML3Q9NRN5 406 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 KBTBD4Q9NVX7 518 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 FAM13BQ9NYF5 915 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 USP25Q9UHP3 1055 aa13.58□□□□□ -0.24
CLCNKA-205ENST00000477360 ARL5CA6NH57 179 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 GRM6O15303 877 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 TRAK2O60296 914 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 NR1I2O75469 434 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 ALDH2P05091 517 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 BCAR1P56945 870 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 GTF2BQ00403 316 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 RNASELQ05823 741 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 GRIK3Q13003 919 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 SPECC1Q5M775 1068 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 RESP18Q5W5W9 173 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 SHC4Q6S5L8 630 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 TAS1R3Q7RTX0 852 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 HAUS6Q7Z4H7 955 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 FAM178BQ8IXR5 827 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 THNSL1Q8IYQ7 743 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 MRPS27Q92552 414 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 DDX12PQ92771 950 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms