RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CCDC148Q8NFR7 591 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 ZNF577Q9BSK1 485 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 ELAC1Q9H777 363 aaKnown RBP8.21□□□□□ -1.1
BRCA1-214ENST00000477152 NRBP2Q9NSY0 501 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 RAPGEFL1Q9UHV5 662 aa8.21□□□□□ -1.1
BRCA1-214ENST00000477152 PRUNE2Q8WUY3 3088 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 CNTNAP5Q8WYK1 1306 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 BDP1A6H8Y1 2624 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 ESYT2A0FGR8 921 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 FAM86C2PA6NEL3 165 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 THBS1P07996 1170 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 CYP3A4P08684 503 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 PPM1AP35813 382 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 PLCB3Q01970 1234 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 KRT17Q04695 432 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 POF1BQ8WVV4 589 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 ZCCHC2Q9C0B9 1178 aaKnown RBP8.2□□□□□ -1.1
BRCA1-214ENST00000477152 TLE6Q9H808 572 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 RC3H2Q9HBD1 1191 aaKnown RBP8.2□□□□□ -1.1
BRCA1-214ENST00000477152 ALG13Q9NP73 1137 aaKnown RBP8.2□□□□□ -1.1
BRCA1-214ENST00000477152 RGS18Q9NS28 235 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 GINS2Q9Y248 185 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 SAMM50Q9Y512 469 aa8.2□□□□□ -1.1
BRCA1-214ENST00000477152 MRPL42Q9Y6G3 142 aaKnown RBP8.2□□□□□ -1.1
BRCA1-214ENST00000477152 KLF18A0A0U1RQI7 1052 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 hCG_1642624A0A1W2PR95 340 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 IPO5O00410 1097 aaKnown RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 PSMA5P28066 241 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 METAP2P50579 478 aaKnown RBP eCLIP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 TMEM62Q0P6H9 643 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 COASYQ13057 564 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 PAN2Q504Q3 1202 aaKnown RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 SUGP1Q8IWZ8 645 aaKnown RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 THNSL1Q8IYQ7 743 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 REXO1Q8N1G1 1221 aaKnown RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 CRIPAKQ8N1N5 446 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 METTL13Q8N6R0 699 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 KLHL23Q8NBE8 558 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 TMEM87AQ8NBN3 555 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 SPPL3Q8TCT6 385 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 CITED4Q96RK1 184 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 LRRC2Q9BYS8 371 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 AGO3Q9H9G7 860 aaKnown RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 NEUROD4Q9HD90 331 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 TLR9Q9NR96 1032 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 TMEM161AQ9NX61 479 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 LZTS1Q9Y250 596 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 PCDHA10Q9Y5I2 948 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 TAF6LQ9Y6J9 622 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 KIAA1671Q9BY89 1806 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 EVPLQ92817 2033 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 IGKV6D-21A0A0A0MT36 114 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 TBKBP1A7MCY6 615 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 DDX39AO00148 427 aaKnown RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 CDC45O75419 566 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 EYA4O95677 639 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 ITGB1P05556 798 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 ARP10275 920 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 SFNP31947 248 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 PFKFB3Q16875 520 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 HERC4Q5GLZ8 1057 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 SWSAP1Q6NVH7 229 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 ABHD15Q6UXT9 468 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 CENPQQ7L2Z9 268 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 RAB11FIP4Q86YS3 637 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 SCLT1Q96NL6 688 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 PCYT2Q99447 389 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 ADAM2Q99965 735 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 ERVK-5Q9HDB9 667 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 NGRNQ9NPE2 291 aaKnown RBP8.19□□□□□ -1.1
BRCA1-214ENST00000477152 CD320Q9NPF0 282 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 DACT1Q9NYF0 836 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 STK39Q9UEW8 545 aa8.19□□□□□ -1.1
BRCA1-214ENST00000477152 CDH23Q9H251 3354 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 EYSQ5T1H1 3165 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 BRWD1Q9NSI6 2320 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 WDR64B1ANS9 1081 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 HOXB8P17481 243 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-214ENST00000477152 ATF7P17544 494 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-214ENST00000477152 IBSPP21815 317 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-214ENST00000477152 IRS1P35568 1242 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 NRIP1P48552 1158 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 DNM2P50570 870 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 JAK3P52333 1124 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 EXOSC10Q01780 885 aaKnown RBP8.18□□□□□ -1.1
BRCA1-214ENST00000477152 CLUL1Q15846 466 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 JAKMIP3Q5VZ66 844 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 CPLX2Q6PUV4 134 aaKnown RBP8.18□□□□□ -1.1
BRCA1-214ENST00000477152 BLOC1S2Q6QNY1 142 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 RIPOR1Q6ZS17 1223 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 EXOC8Q8IYI6 725 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 TRIM22Q8IYM9 498 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 EDAQ92838 391 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 CEP63Q96MT8 703 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 JPH2Q9BR39 696 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-214ENST00000477152 MRPL9Q9BYD2 267 aaKnown RBP8.18□□□□□ -1.1
BRCA1-214ENST00000477152 INO80BQ9C086 356 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-214ENST00000477152 ZMYND12Q9H0C1 365 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 TMEM117Q9H0C3 514 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 ST3GAL5Q9UNP4 418 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms